| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3741 |
|---|
| Symbol | |
|---|
| ID | 6112700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4159717 |
|---|
| End bp | 4160202 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641623527 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001750592 |
|---|
| Protein GI | 170722904 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.641496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.623498 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAAC TCGATCGTAC CGATATCGGC ATTCTCAACA GCCTTCAGGA CAACGCCCGC
ATCACCAACG CAGAACTTGC GCGGTCGGTG AACCTGTCGC CCACGCCCTG TTTCAACCGG
GTCAAGGCCA TGGAAGAGCT GGGTGTGATC CGCCAGCAGG TGACCTTGCT GTCGCCAGAG
GTGCTGGGGC TGGATGTCAA TGTGTTCATC CATGTCAGCC TGGAGAAGCA GGTAGAGCAA
GCGCTGCACC GCTTCGAGGA AGAAATCGCC GAGCGGCCGG AGGTGATGGA GTGCTACCTG
ATGACTGGCG ACCCCGACTA TTTGTTACGG GTGCTGTTGC CGAGCATCCA GGCGCTGGAG
CGGTTTCTCG ATTACCTGAC ACGACTGCCG GGGGTGGCGA ACATACGGTC GAGCTTTGCC
TTGAAGCAGG TGCGGTATAA AACGGCGCTG CCATTGCCGT CCAATGGCAT GACCCTGCGC
GAGTGA
|
|---|
| Protein sequence | MRKLDRTDIG ILNSLQDNAR ITNAELARSV NLSPTPCFNR VKAMEELGVI RQQVTLLSPE
VLGLDVNVFI HVSLEKQVEQ ALHRFEEEIA ERPEVMECYL MTGDPDYLLR VLLPSIQALE
RFLDYLTRLP GVANIRSSFA LKQVRYKTAL PLPSNGMTLR E
|
|---|
| |