| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3740 |
|---|
| Symbol | |
|---|
| ID | 6112699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4158276 |
|---|
| End bp | 4159619 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641623526 |
|---|
| Product | glutamate--putrescine ligase |
|---|
| Protein accession | YP_001750591 |
|---|
| Protein GI | 170722903 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.120298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.581989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG CAGCCCCGCG CTCGCTCGCC GAGCACCTCC AGGGCATCGA CCAGATCGAA
TGTGTCACTC CCGACCTTAA CGGTGTCCCT CGTGGCAAGG TCATGACTGC CGAAGGCTTC
CTCGAAGGCA GGCGCCTGCA AATGGCACGT GGCGTCTTGT TGCAATGCAT CATGGGGGGC
TACCCGCCAG CGAAGTACTA CGGCAGCGAC GATGGTGATC TGGCCCTGGT GGCGGAGCCT
GCGCAGATCC ACCGCTTGCC CTGGAGCGAA GAGGGCCTGG CGCTGGCGAT CTGCGATGCC
AATGAGCTCG ATGGCCGGCC GTCAGGGCTG TCCACCCGCG GGCTGCTCAA AGCGGTGATC
GCCCGCTACG CCGCTTTGGG CCTGGCGCCG GTCGTTGCGA CCGAGCTGGA GTTCTTCGTC
TTTGCGCCCA ACAGTGACCC TGTACAGCCA TTTTCTCCGC CGTTGGGCAA GGACGGCCGT
CGCGAGCTCG GCCACTCGGC ATTCAGTGTC AGTTCCAACA ACGGCCTGCG GCCGTTCTTT
CAGGAGGTTT ATCAGTGCAT GGCGGCGCTG GGCCTGCCGC GCGACACCTT CATGCATGAA
ATGGGCGTCA GCCAGTTCGA AATCAACCTG CTGCACGGCG ACCCCTTGCT GCTGGCCGAC
CAGACCTTCC TGTTCAAGCA CCTGCTCAAG GAAGTCGCGC TCAAGCATGG CCTGACAGTG
GTGTGCATGG CCAAGCCCCT GGCGCATACG CCGGGCAGCT CGATGCATAT TCATCAGAGC
CTGGTGGAGA TCGCCACGGG GCGAAACGTG TTCAGCGATG ACCAGGGGCG GCCGAGCCAG
ACCTTCCATC ATTTCATAGG CGGCCTGCAG GCGTGCATGG CCGATTTCAC TGCGCTGTTC
GCGCCCAATG TCAACTCGTA CCAGCGGCTG TGCCATCCCT ATGCGTCGCC GAACAATGCC
TGTTGGTCGG AGGACAACCG CGCTGCGGGG CTGCGTATTC CGGCCAGCGC CCCCGTAGCG
CGGCGCGTCG AGAACCGCCT GCCGGGCGCT GATGCGAACC CCTACCTGGC CATTGCCGCC
AGCCTGGCAG CCGGCCTGCA CGGCATCGAG CAGCGCCTGG AGCCTGCACC GGCCATCCAG
GGTGAGTTCG AGGTGCCTGA GCACCTGAGC CTGCCATGCA CCCTGCATGC GGCGCTGGAG
CGCCTGAAGG GCAGCGCCTT GGCCCGGGAA CTGTTCGGGG CTGAGTTCAT CGAAGGTTAC
GCTGCCACCA AGGCGCTCGA GTTGACTGAT TTCTACAACG AGATCACGCC GTGGGAGCGG
CGAGTGTTGG CGGCACAAGC CTGA
|
|---|
| Protein sequence | MTTAAPRSLA EHLQGIDQIE CVTPDLNGVP RGKVMTAEGF LEGRRLQMAR GVLLQCIMGG
YPPAKYYGSD DGDLALVAEP AQIHRLPWSE EGLALAICDA NELDGRPSGL STRGLLKAVI
ARYAALGLAP VVATELEFFV FAPNSDPVQP FSPPLGKDGR RELGHSAFSV SSNNGLRPFF
QEVYQCMAAL GLPRDTFMHE MGVSQFEINL LHGDPLLLAD QTFLFKHLLK EVALKHGLTV
VCMAKPLAHT PGSSMHIHQS LVEIATGRNV FSDDQGRPSQ TFHHFIGGLQ ACMADFTALF
APNVNSYQRL CHPYASPNNA CWSEDNRAAG LRIPASAPVA RRVENRLPGA DANPYLAIAA
SLAAGLHGIE QRLEPAPAIQ GEFEVPEHLS LPCTLHAALE RLKGSALARE LFGAEFIEGY
AATKALELTD FYNEITPWER RVLAAQA
|
|---|
| |