Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3729 |
Symbol | flgE |
ID | 6112688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4148819 |
End bp | 4150174 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641623515 |
Product | flagellar hook protein FlgE |
Protein accession | YP_001750580 |
Protein GI | 170722892 |
COG category | [N] Cell motility |
COG ID | [COG1749] Flagellar hook protein FlgE |
TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.293053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTCA ATATCGGCCT TAGCGGTCTG TACGCAGCCA ACAAACAGCT GGACGTTACC GGCAACAACA TCGCCAACGT CAACACCACT GGCTTCAAAT CCTCGCGTGC CGAGTTCGCC GACGTCTATG CCGGCGCCAA TCGCCTGGGT GTGGGCAAGA ACCAGGTCGG CAACGGCGTG CGTCTGGCGG CGATCTCGCA GCAGTTCTCC CAGGGTGACG TCAATAACAC GGGTAACGTG CTGGACATGG GTATCCAGGG TCAGGGCTTT TTCGTCCTGT CCGACAACGG CTCGCGCGTC TACACTCGTG CCGGTGCTTT CCAGGCCGAC AAGAACAACT TCGTGGTCAC CTCTGATGGC CTGCGCCTGC AAGGCTACGC TGCCGATGCC AATGGCAAGA TCCAGAAGGG TGTGCTGTCT GACCTGCAGA TCGACACCTC GGCACTGCAG CCTAAGGCCA CTTCGCTGAT TGACCAAGGC ATCAATCTGA ATTCTTCGGC CACCGACATT CCGCTGGAAA TCGATGATGG CACCGGTGCC ATGGTGCCTA ATCTGCCGTT CGACCCTACT GACGAGACGA CCTACACCAA ATCGTTCCCG ACCAAGGTCT ACGACAGCCA GGGTAACGAA CACACCATGG AGCAGTTCTA CCGCAAGACC GGTACGAACG AATGGACCAT GTACACGTTG GTCGACGGTC GTAACCCGTT CGATCCTGCT TCCACCACGC CGCTGACCGG CACCATCAGT TTCAGCAGCG ATGGGTCTGT CAGCGGCATG ACTGCCGATA ACACAGGGCA CCCGGCGGGT GCATCGTTCA CCGTGACCAA CAACACCTTC ACCATGACTG GTTGGGTGCC GGCAGTGGAA GATGCTGCGG GCAACTGGGC GTCCAATGGC GCTGCCGGCA ACGCCGACGG CATGAAGCTG TCGATGAACA GCACCACGTC CTACAACACC GAGACCGCGC GCATGTCGCA GTCCCAGGAT GGCTACGCCA CCGGTATCCT GTCGAGCCTG AGCATCGACT CCACCGGTGT GCTGTTCGCC AGCTTCAGCA ACCAGCAGTC GCGCGCCATT GGCCAGGTGG CGCTGGCCAG CTTCGCCAAC GAGCAGGGCT TGCAGCAGAT CGGCGGGACC CGCTGGACCG AAACCTTCTC TTCTGGCCTT CCCGGCATCG ATGAGCCCAA GACCGGTACC CTGGGTAGCG TCGAGTCCAA TGCGCTGGAG GCTTCGAACG TCAACCTGAC CCAGGAGTTG GTCGAGCTGA TCAAGGCGCA GAGCAATTAC CAGGCGAACG CCAAGACCAT CTCCACCGAA AGCACCATCA TGCAGACCAT CATTCAGATG ACCTGA
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Protein sequence | MSFNIGLSGL YAANKQLDVT GNNIANVNTT GFKSSRAEFA DVYAGANRLG VGKNQVGNGV RLAAISQQFS QGDVNNTGNV LDMGIQGQGF FVLSDNGSRV YTRAGAFQAD KNNFVVTSDG LRLQGYAADA NGKIQKGVLS DLQIDTSALQ PKATSLIDQG INLNSSATDI PLEIDDGTGA MVPNLPFDPT DETTYTKSFP TKVYDSQGNE HTMEQFYRKT GTNEWTMYTL VDGRNPFDPA STTPLTGTIS FSSDGSVSGM TADNTGHPAG ASFTVTNNTF TMTGWVPAVE DAAGNWASNG AAGNADGMKL SMNSTTSYNT ETARMSQSQD GYATGILSSL SIDSTGVLFA SFSNQQSRAI GQVALASFAN EQGLQQIGGT RWTETFSSGL PGIDEPKTGT LGSVESNALE ASNVNLTQEL VELIKAQSNY QANAKTISTE STIMQTIIQM T
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