Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3718 |
Symbol | |
ID | 6112677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4134311 |
End bp | 4135393 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641623504 |
Product | CDP-glucose 4,6-dehydratase |
Protein accession | YP_001750569 |
Protein GI | 170722881 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.316077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCAG TGGGCCTGAG TCCAGCGTTC TGGCAGGGCA AGCGTGTTCT GCTCACCGGT CACACGGGTT TCAAAGGCAG TTGGCTGGCG CTCTGGTTAC GTGAGCTCGG GGCTCAGGTC ACTGGCTTCG CGCTGGACCC TGGCACCGAA CCAAGCCTGT TCGAGCTTGC CCAGGTCGGC AGCGATATTA CCGACGTGCG CGGCGACCTG CGCGACCTCG GCGCGCTGCT AGAAGCTGTG GCCCAGGCCC AGCCGGAAAT CGTCCTGCAC CTGGCGGCTC AGCCACTGGT GCGCGAGGCC TACCGTGACC CGCTAGGCAC CTATTCCAGC AACGTCATGG GCACCCTTAA TCTGCTTGAA GCGGTACGCC AGGTTGGCGG GGTGCGTGCG TGCGTCCTGG TAACCACCGA TAAGGTCTAT GCCAACCAGG AATGGCCCTG GCCATACCGC GAGAACGAGG CCCTGGGCGG GCATGACCCG TACAGCAGCA GCAAGGCCTG CTGCGAGCTG CTGGCGCAGT CCTATGCCGC GTCATTCTTC CCGGCCGCCG AACACGCAGA ACATGGCGTG GCACTGGCCA CCGCGCGCGC CGGCAATGTA CTGGGCGGCG GAGACTTTGC CGCAGAGCGG CTTGTCCCCG ATGTGCTCAA GGCTTGGTCG GCCGGGGCGC CGGTCACCCT GCGCTACCCG CAGGCCGTGC GCCCCTGGCA GCACGCCCTG GAACCGCTGG CCGGCTACCT GCAACTGGCC GAGCGCCTGT ACACCCAGGG GCCGGCCTGC GCCGGCGCGT GGAACTTCGG CCCGAGCGAA GGCGACATGT GCAGCGTCGG TGAGGTGGTC GACCGCCTGG CCCGGCAATG GCCGCAGGCA CCAGGGTTAC GTGTCGAGCC AAGCGAGTTG CACGAAGCAG GGTTGCTACG CCTGGACAGC TCTCGTGCCC GCCAGGTGCT GGGCTGGCGC ACGCGCTGGT CGTTGCACGA ATGCCTGCAG CACACGCTCG ACTGGCACCT GGCGTGGCAG CGTGGCGATA ACATGCGCGC CGTCACGCTG CACCAGCTGA ACCTGTACAC GGAGTTGCCG TGA
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Protein sequence | MEAVGLSPAF WQGKRVLLTG HTGFKGSWLA LWLRELGAQV TGFALDPGTE PSLFELAQVG SDITDVRGDL RDLGALLEAV AQAQPEIVLH LAAQPLVREA YRDPLGTYSS NVMGTLNLLE AVRQVGGVRA CVLVTTDKVY ANQEWPWPYR ENEALGGHDP YSSSKACCEL LAQSYAASFF PAAEHAEHGV ALATARAGNV LGGGDFAAER LVPDVLKAWS AGAPVTLRYP QAVRPWQHAL EPLAGYLQLA ERLYTQGPAC AGAWNFGPSE GDMCSVGEVV DRLARQWPQA PGLRVEPSEL HEAGLLRLDS SRARQVLGWR TRWSLHECLQ HTLDWHLAWQ RGDNMRAVTL HQLNLYTELP
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