| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3711 |
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| Symbol | |
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| ID | 6112670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4125757 |
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| End bp | 4126758 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641623497 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001750562 |
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| Protein GI | 170722874 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | [TIGR03589] UDP-N-acetylglucosamine 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.724189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACG ACAAGTCCAT TTTCATCTCC GGGGGGACCG GGTCGTTCGG GCGCCGCTTC
ATCGAGCGGT TGCTTGAGCG CTACCGCCCG CGGCGCGTCG TGGTGTTCTC CCGCGACGAG
TTGAAACAGT ATGAGATGCA GCAGCGTTTC AACGCGCCGT GCATGCGCTA CTTCCTGGGC
GATGTCCGTG ATGCCGAGCG CGTGCGCCAG GCCATGCGCG GTATCGACTA TGTGGTTCAT
GCCGCCGCGC TCAAGCATGT GCCCGCTGCC GAGTACAACC CCACCGAATG CATCCGCACC
AACGTCAATG GTGCCGAGAA CATCATCGCC GCCGCGATCG AGAATGGCGT GCAGAAGGTC
GTCGCACTGT CCACCGACAA GGCGGCCAGC CCGATCAACC TGTATGGTGC GACCAAGCTG
CTGTCCGACA AGCTGTTCGT GGCCGCCAAC AATTTCGCCG GCCAACAGGA CACCCGCTTT
GCTGTAGTGC GCTATGGCAA TGTGGCGGGC TCCCGGGGCT CGGTGGTGCC ATTCTTCAAG
CGCCTGATCG AGGAGGGCGC CCGCGAGCTA CCCGTCACTG ACCCACGCAT GACGCGCTTC
TGGATCACCC TCGACCATGG CGTACAGTTC GTGCTCGACA GCTTTGCCCG CATGCACGGG
GGGGAGGTGT TCGTGCCCAA GATCCCGTCA ATTCGCATCG TCGACCTGGC GCGCGGCATG
GCCGGGCACT TGCCGCAGAA CGTGGTCGGC ATCCGCCCGG GGGAAAAGCT GCACGAACTG
ATGATCCCGC TGGACGATGC GCGGATGACC CTTGAGTTTG GTGATCATTT CACCATCGTT
CCGTCGATCC GCTTCAACCA TACGGATGTG GATTTTGCGG TCGATTGCGT GGGTGAAACC
GGGCGCTGGG TTGCAGAGGA TTTCGAGTAC CGTTCCGATA CCAATCCCGC CTTCCTCACC
GTGGACCAGT TGGCAGACCT GCACGCAGGG TTGCCGGCAT GA
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| Protein sequence | MFDDKSIFIS GGTGSFGRRF IERLLERYRP RRVVVFSRDE LKQYEMQQRF NAPCMRYFLG
DVRDAERVRQ AMRGIDYVVH AAALKHVPAA EYNPTECIRT NVNGAENIIA AAIENGVQKV
VALSTDKAAS PINLYGATKL LSDKLFVAAN NFAGQQDTRF AVVRYGNVAG SRGSVVPFFK
RLIEEGAREL PVTDPRMTRF WITLDHGVQF VLDSFARMHG GEVFVPKIPS IRIVDLARGM
AGHLPQNVVG IRPGEKLHEL MIPLDDARMT LEFGDHFTIV PSIRFNHTDV DFAVDCVGET
GRWVAEDFEY RSDTNPAFLT VDQLADLHAG LPA
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