Gene PputW619_3709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3709 
Symbol 
ID6112668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4123861 
End bp4124586 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content62% 
IMG OID641623495 
ProductN-acylneuraminate cytidylyltransferase 
Protein accessionYP_001750560 
Protein GI170722872 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1083] CMP-N-acetylneuraminic acid synthetase 
TIGRFAM ID[TIGR03584] pseudaminic acid CMP-transferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.52779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGC GAATGGAAAC CAGTGTCGCG ATCATCCCGG CCCGGGGAGG CAGCAAGCGT 
ATTCTGCGCA AGAACCTCAA GATGTTTGCC GGGCTGCCGA TCATTGCCCA CTCGATCCGC
GTGGCACTTG CCAGTGGCTT GTTCGAACAG GTAGTGGTCA GCACCGACGA CCCTGAAATA
GAGGCGGTGG CACGGGAATA CGGTGCACAG GTACCGTTCC GTCGGCCGGC GCACCTGGCT
GACGATCATG CCACCACCCA AGCTGTGGTC AGCCACGCCC TGCAGGCACT GGCCAGCCAG
GGCCAGGCCC TGACCCATGC CTGTTGCATC TACGCCACTG CGCCTTTCGT GCAGCAGCGT
TACTTGCAGC AGGGGTTGGC GTTGTTGCGG CAACACCCTG AGCGCTCTTT CGCCTTTTCG
GTGAGCAGCT TCGGTTTCCC GGTCCAGCGG GCGCTGTCGC TCGACGAGCA AGGTGCGCTG
GTGCCTCTGT ATCCTCAGTA TCGTGAGACC CGGTCTCAGG ACCTGGCGCC CGCCTATCAG
GATGCCGGCC AGTTTTACTG GGGGCGGGTG CAGGCCTGGT TGCAGAACGA GGCCCTTCAT
TCCGAGCGGA GCTTGCCAGT AATCATCCCC CGGCATCTGG TTCAGGACAT CGACACAGAG
GAAGACTGGT TGCGCGCGCA ATACTTGTAC GCAGCGCTCA AGGCTGGCGG GGAGCTGGCG
TCATGA
 
Protein sequence
MPERMETSVA IIPARGGSKR ILRKNLKMFA GLPIIAHSIR VALASGLFEQ VVVSTDDPEI 
EAVAREYGAQ VPFRRPAHLA DDHATTQAVV SHALQALASQ GQALTHACCI YATAPFVQQR
YLQQGLALLR QHPERSFAFS VSSFGFPVQR ALSLDEQGAL VPLYPQYRET RSQDLAPAYQ
DAGQFYWGRV QAWLQNEALH SERSLPVIIP RHLVQDIDTE EDWLRAQYLY AALKAGGELA
S