| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3679 |
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| Symbol | fliR |
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| ID | 6112638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4095880 |
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| End bp | 4096656 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641623465 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001750530 |
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| Protein GI | 170722842 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0271988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGGAGC TGACCGACGC ACAGATCGGC ACCTGGGTCG CCACCTTCAT CCTGCCGCTG
TTCCGGGTGA CGGCGGTGCT GATGACCATG CCTATCTTCG GTACCCGCAT GCTGCCGGCG
CGCATTCGCC TGTACGCGGC AGTGGCCATT ACCGTGGTGA TCGTGCCGGC GTTACCGCCG
TTGCCTGAAT TCGACCCACT GAGTTTGCGT GGCTTGTTGT TGTGCGGTGA GCAGATCATC
GTCGGAGCGT TGTTCGGTTT TTCGCTGCAG TTGCTGTTCC AGGCGTTCGT CATTGCCGGG
CAGATCATCG CGATACAGAT GGGTATGGCT TTCGCATCGA TGGTCGACCC GGCCAACGGC
GTCAACGTGG CGGTGGTCAG CCAGTTCATG ACCATGCTGG TGAGCGTGCT GTTCCTGGTG
ATGAACGGCC ATCTGGTCGT GTTTGAAGTG CTGACCGAAA GCTTTACCAC CTTGCCGGTA
GGCAACGCAC TTGTGGTCAA CCACTTTTGG GAGATGGCTG GGCGCCTTAG CTGGGTATTT
GGTGCCGGCC TGCTACTTAT CCTGCCGGCA ATCGCCGCGC TACTGGTGGT GAACATTGCG
TTTGGCGTGA TGACCCGCGC CGCGCCGCAG TTGAACATCT TCTCTATCGG TTTCCCGCTG
ACACTGGTGC TGGGTATGGG CATCTTCTGG GTGGGCCTGG CCGATGTACT TTCCCACTAC
CAGGCATTGG CCAGCGAAGC GCTGCAATGG CTGCGTGAAC TGGCGAGGGC GCGCTGA
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| Protein sequence | MLELTDAQIG TWVATFILPL FRVTAVLMTM PIFGTRMLPA RIRLYAAVAI TVVIVPALPP
LPEFDPLSLR GLLLCGEQII VGALFGFSLQ LLFQAFVIAG QIIAIQMGMA FASMVDPANG
VNVAVVSQFM TMLVSVLFLV MNGHLVVFEV LTESFTTLPV GNALVVNHFW EMAGRLSWVF
GAGLLLILPA IAALLVVNIA FGVMTRAAPQ LNIFSIGFPL TLVLGMGIFW VGLADVLSHY
QALASEALQW LRELARAR
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