| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3653 |
|---|
| Symbol | |
|---|
| ID | 6112612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4066552 |
|---|
| End bp | 4067184 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641623439 |
|---|
| Product | cytochrome c biogenesis protein CcmA |
|---|
| Protein accession | YP_001750504 |
|---|
| Protein GI | 170722816 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
|---|
| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCTTC ACCTCCAAGC CGTGGGCCTG GCCTGCGAGC GCGACTGGCG CCTGCTGTTC
GAGCACCTGG ATTTCGAGCT GCGGCCAGGC GACATGCTGC AGATCAGCGG CCCCAACGGC
AGCGGAAAGA CCAGCCTGCT GCGCCTGATG GCCGGGCTGA TGCAGCCGAC TGCCGGGCAG
ATCCTGCTGG GCGGCAAGCC GTTGGCCGAA CAACGCCATG CGCTGGCTAG CATCCTGCTG
TGGATCGGCC ATGCTGCCGG CATCAAGGAC TTGCTCAGCG CTGAAGAAAA CCTGGCCTGG
CTGTGTGCCT TGCACCAGCC TGCCACAGCC GAAGCGATCA GGACTGCTCT GGAAGCGGTC
GGCTTGCGCG GTTTCGAAGA TGTTCCCTGC CATACCCTGT CTGCCGGGCA GCAGCGCCGT
GTAGCGCTTG CCCGGCTGTA CTTGCACAGC CCGCCGTTGT GGATCCTCGA TGAACCCTTC
ACCGCGCTGG ACAAGCAAGG GGTCGCGCAG TTGGAGGCCC ATCTGGCACG CCATTGCGAG
CGCGGCGGCA CGGTGGTGCT GACCACCCAC CACACGCTTG ACCAAAAGCC CTCCGGCTAT
CGCGAACTGA ACCTGGGGCA ATGGGCGGCA TGA
|
|---|
| Protein sequence | MTLHLQAVGL ACERDWRLLF EHLDFELRPG DMLQISGPNG SGKTSLLRLM AGLMQPTAGQ
ILLGGKPLAE QRHALASILL WIGHAAGIKD LLSAEENLAW LCALHQPATA EAIRTALEAV
GLRGFEDVPC HTLSAGQQRR VALARLYLHS PPLWILDEPF TALDKQGVAQ LEAHLARHCE
RGGTVVLTTH HTLDQKPSGY RELNLGQWAA
|
|---|
| |