Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3650 |
Symbol | |
ID | 6112609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4064900 |
End bp | 4065076 |
Gene Length | 177 bp |
Protein Length | 58 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641623436 |
Product | heme exporter protein CcmD |
Protein accession | YP_001750501 |
Protein GI | 170722813 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3114] Heme exporter protein D |
TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.649562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTTT CTTCATTCGG CGATTTCCTC GCCATGGGCC ACCATGGCCT GTATGTCTGG TCGGCCTACG CCATCTGCAT GGTAGTGCTG GCGGTCAATG TCGCCGCGCC ATTGCTGGCC CGCCGTCGCT ATCTGCAAGA AGAGGCGCGC CGTCTGCGCC GGGAGAACAA CCAGTGA
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Protein sequence | MSFSSFGDFL AMGHHGLYVW SAYAICMVVL AVNVAAPLLA RRRYLQEEAR RLRRENNQ
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