| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3643 |
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| Symbol | |
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| ID | 6112602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4058751 |
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| End bp | 4059689 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641623429 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001750494 |
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| Protein GI | 170722806 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0350329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA CAGTCCTGGT GTTGGTGGAA ACCGTCGATG ATTACCTGCA CCTGCTCGAA
CAGGCCGGCT ACCGGCTGAT CCGCGCACCT TCCGCGCCAC TGCGTGCCGA TGCCATCCAG
CGCCATGGCA CTGAAATCGA TGCGGTGCTT ACCCGCGGCC CGCTGGGCCT GACCGCTGCT
GAAATCCAAG CGTTGCCCAG CTTGCAGATC ATCTGCGTGA TCGGCGCCGG TTACGAACAC
GTCGACCTGG CCGCCGCCGC TGCCCGTGGC ATTACCGTCA CCAATGGCGC GGGTGCCAAT
GCCGCCGCCG TGGCCGACCA CACCTTGGCG ATGCTGCTGG CGCTGCTGCG CGACATTCCC
CGCGCCGATG CCGGTATCCG CCGAGGCGAG TGGAACCGGG TCATCAGCCC CTCGGTAAGT
GGCAAGCGCC TCGGCATCCT CGGCCTGGGT GCGGTTGGGC TGGCTATCGC CAGGCGTGCC
AGCCTCGGCT TCGACATGAA CATCAGCTAC CACAGCCGCA CACCGCGCCA GGACGTGCCT
TACACCTGGT ACGACAGCCC GTTGCACCTG GCCGATGCCG TCGACATTCT GGTTGTGGCG
ACCCCGGGTG GCGCCAGTAC GCACCATCTG GTCGATGCTC AGGTGCTCGA GGCTTTGGGC
CCCGAGGGCT ACCTGGTGAA CATCGCCCGT GCCAGCGTGG TGGATACCAA GGCCCTGGTC
GGCGCGCTGC AGCGCGGGCA ACTTGCAGGT GCAGCACTTG ATGTGTTCGA TGACGAACCG
GCCGTGCCCG ATGCGCTGAA GGCCCTCGGC AATACGGTGC TCACCCCGCA TGTAGCCGGT
CAATCCCCTG AAGCGGCGCG CGACACGGTG GCCTTGGTCC TGCGCAATCT ACAGGCCTTC
TTTGCCGGCG AACCGGTACT CACACCAGTC CATCCGTAA
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| Protein sequence | MSKTVLVLVE TVDDYLHLLE QAGYRLIRAP SAPLRADAIQ RHGTEIDAVL TRGPLGLTAA
EIQALPSLQI ICVIGAGYEH VDLAAAAARG ITVTNGAGAN AAAVADHTLA MLLALLRDIP
RADAGIRRGE WNRVISPSVS GKRLGILGLG AVGLAIARRA SLGFDMNISY HSRTPRQDVP
YTWYDSPLHL ADAVDILVVA TPGGASTHHL VDAQVLEALG PEGYLVNIAR ASVVDTKALV
GALQRGQLAG AALDVFDDEP AVPDALKALG NTVLTPHVAG QSPEAARDTV ALVLRNLQAF
FAGEPVLTPV HP
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