| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3622 |
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| Symbol | |
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| ID | 6112581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4033669 |
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| End bp | 4035444 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641623408 |
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| Product | glyoxylate carboligase |
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| Protein accession | YP_001750473 |
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| Protein GI | 170722785 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3960] Glyoxylate carboligase |
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| TIGRFAM ID | [TIGR01504] glyoxylate carboligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA TGAGAGCAAT CGATGCAGCC GTTCTGGTCA TGCGCCGTGA AGGTGTAGAT
ACCGCGTTCG GCATCCCAGG GGCTGCCATC AACCCGTTGT ACTCGGCCCT GAAAAAAGTC
GGTGGCATCG ATCACGTCCT CGCTCGTCAC GTTGAAGGCG CCTCGCACAT GGCCGAGGGT
TACACCCGCG CCAACCCAGG CAACATCGGC GTGTGCATCG GCACCTCCGG CCCCGCCGGC
ACCGACATGG TCACCGGCCT GTACAGCGCA TCGGCCGACT CCATCCCGAT TCTCTGCATC
ACTGGCCAGG CGCCACGTGC CCGTCTGCAC AAGGAAGACT TCCAGGCTGT CGACATCACC
AGCATCGTCA AGCCCGTCAC CAAGTGGGCG ACCACCGTTC TGGAACCAGG CCAAGTGCCT
TATGCCTTCC AGAAAGCCTT CTACGAAATG CGTACCGGCC GCCCAGGCCC TGTGTTGATC
GACCTGCCGT TCGACGTGCA GATGGCCGAA ATCGAGTTCG ACATCGACGC CTACGAGCCG
CTGGCCGTCA ACAAGCCCTG CGCCACTCGC GTGCAGGCTG AAAAAGCCCT GGCCCTGCTC
AACGACGCCG AGCGCCCACT GCTGGTGGCC GGTGGCGGCA TCATCAACGC CGACGCCAGC
GACAAGCTGG TGGAGTTCGC CGAACTGACC GGCGTGCCAG TCATCCCGAC CCTGATGGGC
TGGGGCACCA TCCCGGACGA CCACGCCCAG ATGGTCGGCA TGGTCGGCCT GCAGACCTCG
CACCGCTACG GCAACGCCAC CCTGCTCAAG TCCGACCTGG TGTTCGGTAT CGGTAACCGT
TGGGCCAACC GTCACACCGG TTCCGTTGAC GTTTACACCG AAGGCCGCAA ATTCGTTCAC
GTCGACATCG AGCCTACCCA GATCGGCCGC GTGTTCACTC CTGACCTGGG TATCGTTTCC
GATGCAGGCC TGGCGCTGGA CGTGTTCATC GAAGTGGCCC GCGAGTGGAA AGCCGCCGGC
AAGCTGCAGT GCCGCAAAGC CTGGCTGGAA GACTGCCAGC AGCGTAAATC GAGCCTGCAG
CGCAAGACCC ACTTCGACAA CGTACCGGTC AAGCCGCAGC GCGTTTACGA AGAGATGAAC
CAGGTGTTCG GCAAGGACAC CTGCTACGTC AGCACCATTG GCCTGTCGCA AATCGCCGGC
GCGCAGTTCC TGCACGTATA CAAGCCACGC CACTGGATCA ACTGTGGCCA GGCCGGCCCG
CTCGGCTGGA CCATCCCGGC GGCACTGGGT GTGGTCAAGG CCGACCCGAA ACGCAAGGTT
GTGGCGCTGT CGGGTGACTA CGACTTCCAG TTCATGATCG AAGAGCTGGC CGTGGGCGCG
CAGTTCAACC TGCCGTACGT ACACGTGCTG GTGAACAACG CCTACCTGGG CCTGATCCGT
CAGGCGCAGC GTGGCTTCGA CATGGATTAC TGTGTACAAC TGGCGTTCGA GAACATCAAC
TCCACCGACG CCGCCACCTA CGGTGTCGAT CACGTCGCCG TGGTCGAAGG CTTGGGCTGC
AAGGCCATCC GTGTCTTCGA GCCGGGTGAA ATTGCCCCGG CACTGCTCAA GGCACAGAAG
ATGGCCGAAG AGTTCCGAGT ACCGGTCGTG GTGGAAGTGA TTCTGGAGCG TGTGACCAAC
ATTTCCATGG GCACCGAGAT CAACGCGGTC AACGAGTTCG AAGACCTGGC TCTGGTCGGC
AACGACGCGC CAACCGCCAT CTCGATGCTG GACTGA
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| Protein sequence | MSKMRAIDAA VLVMRREGVD TAFGIPGAAI NPLYSALKKV GGIDHVLARH VEGASHMAEG
YTRANPGNIG VCIGTSGPAG TDMVTGLYSA SADSIPILCI TGQAPRARLH KEDFQAVDIT
SIVKPVTKWA TTVLEPGQVP YAFQKAFYEM RTGRPGPVLI DLPFDVQMAE IEFDIDAYEP
LAVNKPCATR VQAEKALALL NDAERPLLVA GGGIINADAS DKLVEFAELT GVPVIPTLMG
WGTIPDDHAQ MVGMVGLQTS HRYGNATLLK SDLVFGIGNR WANRHTGSVD VYTEGRKFVH
VDIEPTQIGR VFTPDLGIVS DAGLALDVFI EVAREWKAAG KLQCRKAWLE DCQQRKSSLQ
RKTHFDNVPV KPQRVYEEMN QVFGKDTCYV STIGLSQIAG AQFLHVYKPR HWINCGQAGP
LGWTIPAALG VVKADPKRKV VALSGDYDFQ FMIEELAVGA QFNLPYVHVL VNNAYLGLIR
QAQRGFDMDY CVQLAFENIN STDAATYGVD HVAVVEGLGC KAIRVFEPGE IAPALLKAQK
MAEEFRVPVV VEVILERVTN ISMGTEINAV NEFEDLALVG NDAPTAISML D
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