Gene PputW619_3618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3618 
Symbol 
ID6112577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4030292 
End bp4031074 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content58% 
IMG OID641623404 
Producthypothetical protein 
Protein accessionYP_001750469 
Protein GI170722781 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3248] Nucleoside-binding outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.115342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACCA TCAATAGCCT GATTCTCGCG GGCGGCCTGC TGGCCTGCGG CACCACCTAC 
GCCGATGACC TGCTGCAGTG GCAGAACAAC AGCCTGACCT ACCTGTGGGG CAAGAACTTC
AAGGTCAACC CGGCGATCCA GCAAACCGTC ACCTTCGAGC ACGCCGATGG CTGGAAATAC
GGCGACAACT TCATCTTCGT CGACAAGATC TTCTACAACG GCAAGAAGGA CTCGGGTAAC
GGCGACAACA CCTACTACGG TGAAATCAGC CCGCGTCTGT CGTTCGGCAA GATCTTCGAC
CAGAAGCTCG CCTTCGGCCC GGTCAAGGAC GTGCTGCTGG CAATGACCTA TGAGTTTGGC
GAGGGTGATA CCGAGTCCTA CCTGATCGGC CCTGGCTTCG ACCTGGACAT CCCGGGCTTC
GACTACTTCC AGCTGAACTT CTACCAGCGC ACCACCGACG GCAGCCGGGC CGGTGACAAC
GTCTGGCAGA TCACACCGGT GTGGTCGTAC ACCATCCCTG TGGGCTCCTC CGACATCCTC
ATCGACGGTT TCATGGACTG GGTGGTCGAC AACGACGAGA ACCGCCGCGG TACCTACCAG
GCCAACCTGC ACTTCAACCC GCAGGTCAAA TATGACCTGG GCAAGGCGCT GCATCTGGGT
GAGAAGCAGT TGTATGTGGG CTTTGAGTAC GACTACTGGA AGAACAAGTA CGGGATCAAG
GATTCCGACG GGTTCACCAC CGATCAGAAC ACTGCAAGCT TCCTGGTCAA GGTTCACTTC
TGA
 
Protein sequence
MRTINSLILA GGLLACGTTY ADDLLQWQNN SLTYLWGKNF KVNPAIQQTV TFEHADGWKY 
GDNFIFVDKI FYNGKKDSGN GDNTYYGEIS PRLSFGKIFD QKLAFGPVKD VLLAMTYEFG
EGDTESYLIG PGFDLDIPGF DYFQLNFYQR TTDGSRAGDN VWQITPVWSY TIPVGSSDIL
IDGFMDWVVD NDENRRGTYQ ANLHFNPQVK YDLGKALHLG EKQLYVGFEY DYWKNKYGIK
DSDGFTTDQN TASFLVKVHF