| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3615 |
|---|
| Symbol | |
|---|
| ID | 6112574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 4026169 |
|---|
| End bp | 4027497 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641623401 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001750466 |
|---|
| Protein GI | 170722778 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3748] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.130992 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAGCAC ACCTTCACGA ATGGCTGAAC CTGAGCATTC GCTGGGTTCA CATGATCACC
GGCGTGGCCT GGATCGGTGC ATCGTTCTAC TTCGTCTGGC TGGAAAACAA CCTGAACCGG
AGCAATCCGC GTGACGGGCT GTCGGGTGAC CTTTGGGCCA TCCACGGCGG TGGTATCTAC
CACCTTGAGA AGTACAAGCT GGCGCCGCCG AAAATGCCCG AGAACCTGCA CTGGTTCAAA
TGGGAAGCCT ACTTCACCTG GATGTCCGGT ATCGCCCTGC TGTGCGTGGT GTTCTACTGG
AACCCGACCC TGTACCTGCT GGCCCCTGGC AGCACCCTGA GCGGTGCCGA GGGCGTGGCC
ATCGGTATCG GTTCGCTGGT GGCCGGCTGG TTCATCTACG ACCTGCTCTG CGATTCGCCA
CTGGGCAAAC GCCCGGCGCT GCTTGGCGCC GTGCTGTTCG TACTGATCAT CGCCGCTTGC
TGGGGCTTCA GCCTGGTGTT CAGCGGCCGT GGCGCGTACC TGCACACCGG CGCGATCATC
GGCACCATCA TGGTCGGTAA CGTGTTCCGC ATCATCATGC CGGCCCAGCG CCAGCTGGTG
GCAGCGATCG AGAACAACAC CACCCCCGAC CCGCGCCTGC CGGCCAAAGG CCTGCTGCGT
TCGCGTCACA ACAACTACTT CACCCTGCCG GTGCTGTTCA TCATGATCAG CAACCACTTC
CCGAGCACCT ACGGTAGCCA GTACAACTGG CTGATCCTGG CCGGCATTGC CGTAGCCGCG
GTACTGATCC GCCACTACTT CAACACCCGC CACGACAGCA GCAAGTACGC CTGGACCCTG
CCGGCCGGTG CCCTGGCGAT GATCTGCCTG GCTTACGTCA CCGGCCCGAA ACCGATGGCC
GTTGACCCTG AGCAGGCCGC GGCGAAGGTC GAGTACCAGC CACTGCCAGC AACTGCAGTG
GGTGGCAAGA CCGCTGCCGA ACAGCGCGCC GAGGACGCTG CCAAGGCGGC CCAAGCTCCT
GCCGCGCCGG CTCAAGCCCC AGCCCAGGCG ACGGCTCAGG CCGGTGGCGG TGCCTTCGAC
AAGATCCACA CCGTCATCCA GGAACGCTGC ACAGTGTGCC ACTCGTCGAA GCCGACCAGC
CCGCTGTTCA GCACCGCCCC TGGCGGCGTG GTGTTCGACA CCCCGCAGCA GATCCAGGCT
CAGGCCGCGC GCATTCAGGC GCAAGCGGTC GCCAGCCAGA TCATGCCGCT GGGCAACATC
ACCCAGATGA CCGTCGAGGA ACGCAAGCTC GTCGGTGACT GGATCGCCAA AGGCGCCCAG
GTCAACTGA
|
|---|
| Protein sequence | MEAHLHEWLN LSIRWVHMIT GVAWIGASFY FVWLENNLNR SNPRDGLSGD LWAIHGGGIY
HLEKYKLAPP KMPENLHWFK WEAYFTWMSG IALLCVVFYW NPTLYLLAPG STLSGAEGVA
IGIGSLVAGW FIYDLLCDSP LGKRPALLGA VLFVLIIAAC WGFSLVFSGR GAYLHTGAII
GTIMVGNVFR IIMPAQRQLV AAIENNTTPD PRLPAKGLLR SRHNNYFTLP VLFIMISNHF
PSTYGSQYNW LILAGIAVAA VLIRHYFNTR HDSSKYAWTL PAGALAMICL AYVTGPKPMA
VDPEQAAAKV EYQPLPATAV GGKTAAEQRA EDAAKAAQAP AAPAQAPAQA TAQAGGGAFD
KIHTVIQERC TVCHSSKPTS PLFSTAPGGV VFDTPQQIQA QAARIQAQAV ASQIMPLGNI
TQMTVEERKL VGDWIAKGAQ VN
|
|---|
| |