| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3601 |
|---|
| Symbol | zipA |
|---|
| ID | 6112560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4008213 |
|---|
| End bp | 4009097 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641623387 |
|---|
| Product | cell division protein ZipA |
|---|
| Protein accession | YP_001750452 |
|---|
| Protein GI | 170722764 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG3115] Cell division protein |
|---|
| TIGRFAM ID | [TIGR02205] cell division protein ZipA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00102901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCG GTCTGCGCGA GTGGCTGATC CTCATCGGCA TCATTGTCAT CGCCGGTATT
CTTTTCGACG GCTGGCGCCG TATGCGCGGC GGAAAAGGCA AGTTGAAATT CCGTCTGGAT
CGCAGTTATT CCAACCTCCC GGACGAGGAA GGCAGCGCTG AGGTGCTGGG CCCGTCGCGG
GTGCTCGATA CCCAGAAGGA GCCGGAGCTG GACGAAAGCG ACCTGCCGTC GCTCAGTGCG
CCGGCGCGTG AGCGCGAGCG CGAGCAGAAA CCGGCTAAAG CCACCAAGCG TGGCAAACGT
GCCGCTGAAA TGCAGCCGCA GGGTGATCTG GACCTGGTGG CCGAACCGCG CGAGCCCGAC
CTGTTCGCCG ATGCCGATGA CGATTTTGCT GGCGACAACA ACCGCAACAG TGGTTTTGCT
GCTGCGGGCA GTGCTGCCAA GGAGCTGCCG CCGGTCGAAG AGGTGCTGGT GATCAGCGTG
ATCTCGCGCG ACGAAGGTGG CTTCAAGGGC CCGGCGCTGC TGCAGAATAT TCTTGAAAGC
GGTTTGCGCT TCGGTGAAAT GGACATTTTC CACCGTCACG AAAGCATGGC CGGTCACGGC
GAAGTCCTGT TCTCCATGGC CAATGCGGTC AAGCCCGGCA TTTTCGACCT GGACGACATC
GATCACTTCA GCACCCGTGC GGTGAGCTTC TTCCTCGGGC TGCCAGGGCC ACGCCACCCG
AAACAGGCCT TCGATGTGAT GGTCGCTGCG GCGCGCAAGC TGGCCCACGA GCTCAATGGC
GAGCTCAAGG ATGATCAGCG CAGCGTGCTC ACCGCCCAGA CCATCGAGCA TTACCGCCAG
CGCATCGTCG AGTTCGAGCG CCGCGCGCTG ACCCAGAAAC GCTGA
|
|---|
| Protein sequence | MEIGLREWLI LIGIIVIAGI LFDGWRRMRG GKGKLKFRLD RSYSNLPDEE GSAEVLGPSR
VLDTQKEPEL DESDLPSLSA PAREREREQK PAKATKRGKR AAEMQPQGDL DLVAEPREPD
LFADADDDFA GDNNRNSGFA AAGSAAKELP PVEEVLVISV ISRDEGGFKG PALLQNILES
GLRFGEMDIF HRHESMAGHG EVLFSMANAV KPGIFDLDDI DHFSTRAVSF FLGLPGPRHP
KQAFDVMVAA ARKLAHELNG ELKDDQRSVL TAQTIEHYRQ RIVEFERRAL TQKR
|
|---|
| |