| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3598 |
|---|
| Symbol | |
|---|
| ID | 6112556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4002391 |
|---|
| End bp | 4003515 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641623384 |
|---|
| Product | RNA-directed DNA polymerase (reverse transcriptase) |
|---|
| Protein accession | YP_001750449 |
|---|
| Protein GI | 170722761 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCTC CGCTATATCC GCACAAGCCA ATCCACAGCA TTCGAGCTTT AGCGCTGGCG
CTTGGTGAGA GCGAAGCGCT GTTAGAACGG CTTGCCGCTC GTGCGGACCG AATGTACCGC
CATGTCCCCC AAGAGAAGAA GGTCAAGCCT GGTCAGCCAC CCGAGACGCG TGATACCTAC
GACGCCCATG AGCCGCTGAA GCGAATCCAG CGAAAGCTCG TTGATCGAGT GCTGTCTAAA
GCGATATTCC CGACCTATCT GCACGGGGGT ATAAGAGACT GTAAGTCCCC ACGGAGCATC
CACAGTAACG CTGCTGTACA TGCGGGGGCG CGATTTGTCA TCCTTCAAGA CATTCGTAAT
TTCTACCCTT CCATATCTAA GAGCCATGTT CATGCCATGT TCCGGGGGTT GTTCGGGTTC
GGAGCTGGCG TTGCGGAACT GTTGTCATCT CTATGTACCC GTTCTGGAAG CACGCCTCAA
GGCGCCAGTA CGAGTGGCTA CATCGCAAAT TTAGTATTCT GGGATGTGGA ACCGAAGGTG
GTTAGCGATC TTTCGGGTAA AGGGTTTCAG TACTCCCGAT TCGCCGATGA CATTACTATC
TCCTGTACGC GTGAGCCGGA AGCGGATGAG CTTACCGGTA TTGTCTCAGC AATCACTGGT
ATGTTGGCTT CCAAGGGGTG TCATCAGAAG CGGAGCAAGC TCCATGTGCG GATACGTGGG
CAGGCTCTTA AGTCGGAAGG CACTACTTTC CAGCCGATTA CGGTTACCGG TCTGAGCATT
TTCAATGCTT CCCCAGGACT CACGAAGTCG GAACGGAAAC GTATACGCTC TGCCGTAAGG
GAGCTTGAGC TGTCTAGCGA GACGACCTCT AATTGGGTCG AGCTTGAACC AATGTATCAC
CGTGCCATGG GCCGTGTGGG ACGGCTTCTG GCCTGCGCAC ATCCAGATGG AGAGTCGCTC
AAGGTAAGGC TCAACTTGAT TAAACGGTCT TATGAGAAGC CCTTACTTGA GCGCTATCAG
CAGGAAATCG TCGAGCAATC TGCGCGGGAA ATTAATAATG TCTCCTGTGC TCGGACGTTA
CCTTCTCAGC CAACTGAACC GGTTGACTCC CCGCCTTGGG AGTAA
|
|---|
| Protein sequence | MKAPLYPHKP IHSIRALALA LGESEALLER LAARADRMYR HVPQEKKVKP GQPPETRDTY
DAHEPLKRIQ RKLVDRVLSK AIFPTYLHGG IRDCKSPRSI HSNAAVHAGA RFVILQDIRN
FYPSISKSHV HAMFRGLFGF GAGVAELLSS LCTRSGSTPQ GASTSGYIAN LVFWDVEPKV
VSDLSGKGFQ YSRFADDITI SCTREPEADE LTGIVSAITG MLASKGCHQK RSKLHVRIRG
QALKSEGTTF QPITVTGLSI FNASPGLTKS ERKRIRSAVR ELELSSETTS NWVELEPMYH
RAMGRVGRLL ACAHPDGESL KVRLNLIKRS YEKPLLERYQ QEIVEQSARE INNVSCARTL
PSQPTEPVDS PPWE
|
|---|
| |