| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3570 |
|---|
| Symbol | |
|---|
| ID | 6112528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 3974106 |
|---|
| End bp | 3974714 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641623356 |
|---|
| Product | cbb3-type cytochrome c oxidase subunit II |
|---|
| Protein accession | YP_001750421 |
|---|
| Protein GI | 170722733 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
|---|
| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATG AAGTCATCGA AAAAAACGTC GGCCTGCTGG CCCTGTTGAT GGTGTTCGCC
GTCAGCATCG GCGGCCTGAC CCAGATCGTC CCGCTGTTCT TCCAGGACGT CACCAACAAG
CCGGTCGAAG GCATGAAGCC TTACACCGCG CTGCAGCTTG AAGGCCGCGA TATCTATATC
CGCGAAGGTT GCGTGGGCTG CCACTCGCAG ATGATCCGCC CGTTCCGCGC CGAGACAGAA
CGCTACGGCC ACTACTCGGT GGCCGGTGAA AGTGTGTGGG ACCACCCGTT CCTGTGGGGC
TCCAAACGCA CCGGCCCGGA CCTGGCCCGG GTCGGCGGGC GCTACTCAGA CGACTGGCAC
CGCGCGCACC TGTACAACCC GCGCAACGTG GTGCCGGAGT CGAAGATGCC GTCCTACCCA
TGGCTCGTCG CCCAGCAGGT CGACAACAGC CACACCGACA CCAAGATGCG CACCCTGCGC
ACCCTGGGGG TGCCGTACAC CGACCAGGAC ATTGCCGGTG CGCGTGATGC GGTCAAGGGC
AAGACCGAGA TGGACGCCCT GGTCGCCTAC TTGCAGGTGC TCGGCACCGC GATCAAGAAC
AAGAGGTGA
|
|---|
| Protein sequence | MKHEVIEKNV GLLALLMVFA VSIGGLTQIV PLFFQDVTNK PVEGMKPYTA LQLEGRDIYI
REGCVGCHSQ MIRPFRAETE RYGHYSVAGE SVWDHPFLWG SKRTGPDLAR VGGRYSDDWH
RAHLYNPRNV VPESKMPSYP WLVAQQVDNS HTDTKMRTLR TLGVPYTDQD IAGARDAVKG
KTEMDALVAY LQVLGTAIKN KR
|
|---|
| |