| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3540 |
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| Symbol | |
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| ID | 6112498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3903178 |
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| End bp | 3904833 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641623327 |
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| Product | cyclic peptide transporter |
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| Protein accession | YP_001750392 |
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| Protein GI | 170722704 |
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| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.495743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.985666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCA AAACCCGCGG GGCACTGAGC GAGCTGTTCA CCCTGCTCAA ACCGTTCTGG
CCGATCGTCT CCCTGTCGGT CGTCATGGGC ATGGTCGGCG GCCTTAGCGT TACCGCTCTG
CTGGCCACCA TCAACAGTGG CCTGCACGCC GACGGTGGCC TGAGCAACAG CGTGATCCTC
GGCTTCGCCG GGCTGTGTGC GCTGGCCCTG GCCAGCTCGA TCTGCTCCGA CATCGGCACC
AACTACGTCG GCCAGCACAT CATCGCCAAA CTGCGCAAAG CCCTGGGCGA AAAGGTACTG
TCAGCCCCGA TCGAGCAGAT CGAACGTTTC CGCAGCCACC GCCTGATCCC GGTGCTGACC
CATGACGTCG ATACCATCAG CGACTTCGCC TTTGCCTTTG CGCCCCTGGC GATCTCGCTG
ACCGTAACCC TTGGCTGCCT GGGTTACCTG GCCACCCTGT CATTGCCGAT GTTCCTGATG
ATGCTGCTGG CAATCGGTAT CGGCAGTGTC GTCCAGTACA TCGCCCGAGG CCGTGGCATC
AAAGGCTTCA TGGCGGCGCG CGACGCAGAA GACCGGCTGC AGAAGCACTA CCACGCCATC
GCCGAGGGGG CCAAGGAGCT GCGCATCCAC CGCCCGCGGC GCCAGCGTAT GTTCCGCCAG
GGCATCCAGG ACACCGCCGA CGCGATCTGC GCCACCCAGG TCCGCTCGAT CAACACGTTC
GTCATTGCCA AGAGCTTCGG CTCCATGCTG TTCTTCGTGG TCATCGGCCT GGGCCTGACC
CTGCAGTTCC TCTGGCCAAG CGCCGACCCC AAGGCCATCA GCGGCTTCGT GCTGGTGCTG
CTGTACATGA AAGGCCCGCT GGAACACCTG ATCGGCACCT TGCCGGTGGT CAGCCGCGCG
CAAATCGCCT TTCGCCGTAT CGCCGAGCTT TCCGAGCAGT TTTCTTCGCC TGAACCGCAC
CTGCTGCTGG AGGACCACGG CAACCAGCCT GTCGTGGTCG ACAGCCTGGA ATTGCGCGAG
GTGAGCTACG CCTATCAGGC CAGCCCCGGC GCCCAACCGT TCCAGGTAGG GCCGGTGAAC
CTGCGCATCG CCCAGGGCGA CATCGTCTTT GTGGTCGGTG AAAACGGCTG TGGCAAGACC
ACCCTGATCA AGCTGCTGCT GGGCCTGTAC CCGCCGCAAC AGGGGCAGAT CCTGCTCAAC
GGCCAGGCCG TCGACGCACA GGTTCGCGAC GACTACCGGC AATTGTTCAC CACAGTGTTC
GCCGACTACT ACCTGTTCGA TGATGTGGTG CAGGGGGACA CGCACATCCC CGAAGACGCC
AACCGCTACC TGGAGCGCCT GGAAATCGCC CACAAGGTCA GCGTCAAGGA CGGTGCGTTC
AGCACCACCG ACCTGTCCAC CGGCCAGCGC AAGCGCCTGG CGCTGATCAA CGCTTGGCTG
GAAGAGCGCC CGGTGCTGGT GTTCGATGAA TGGGCCGCCG ACCAGGACCC GACCTTCCGG
CGGATTTTCT ACACTGAGCT GCTGCCCGAC CTCAAGCGCC TGGGCAAGAC CATCATTGTC
ATTTCCCACG ATGACCGCTA CTTCGACATC GCCGACCAAC TGGTGCGGCT GCAGGCCGGC
AAAGTCGTCG TCGAACACGC ACCCGCCCTC GCCTGA
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| Protein sequence | MTSKTRGALS ELFTLLKPFW PIVSLSVVMG MVGGLSVTAL LATINSGLHA DGGLSNSVIL
GFAGLCALAL ASSICSDIGT NYVGQHIIAK LRKALGEKVL SAPIEQIERF RSHRLIPVLT
HDVDTISDFA FAFAPLAISL TVTLGCLGYL ATLSLPMFLM MLLAIGIGSV VQYIARGRGI
KGFMAARDAE DRLQKHYHAI AEGAKELRIH RPRRQRMFRQ GIQDTADAIC ATQVRSINTF
VIAKSFGSML FFVVIGLGLT LQFLWPSADP KAISGFVLVL LYMKGPLEHL IGTLPVVSRA
QIAFRRIAEL SEQFSSPEPH LLLEDHGNQP VVVDSLELRE VSYAYQASPG AQPFQVGPVN
LRIAQGDIVF VVGENGCGKT TLIKLLLGLY PPQQGQILLN GQAVDAQVRD DYRQLFTTVF
ADYYLFDDVV QGDTHIPEDA NRYLERLEIA HKVSVKDGAF STTDLSTGQR KRLALINAWL
EERPVLVFDE WAADQDPTFR RIFYTELLPD LKRLGKTIIV ISHDDRYFDI ADQLVRLQAG
KVVVEHAPAL A
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