| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3539 |
|---|
| Symbol | |
|---|
| ID | 6112497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 3902222 |
|---|
| End bp | 3903103 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641623326 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001750391 |
|---|
| Protein GI | 170722703 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTT CCCTGCATCG CCTGACCCTG GCCGGCCTGC TGGCCGCCTG CAGCCTGCCG
GCCCTGGCAG CACAAGCCGC CAATACCCCA GGCACGGTGT TCCGTGACTG CGACAAGCTC
TGCCCGGAGA TGGTGGTGCT GCCCGCCGGC ACCTTCAACA TGGGCACCCC GGCCGACGAA
ATGGGACGCC AGGATGACGA AGGTCCGCAG CATGCGGTGA CCTTCGCCAA GCCCTTCGCC
ATCAGCCGCT TCCAGGTGAC CGCCGAGCAA TGGGACGGCT ACCTCGAGGC CACGGGCACG
CGCATCGCCG ACGGCGACGA TCGCCCTGGC CGCCGCTGCA CCGCCAGCAA GCCCAGTTAC
AAACAGGGCC CGCAGCAACC GGCAGTGTGC ATGAGCTACC ACGATGTGCA GGACTACGTG
GCCTGGCTGT CGAAAAAGAC CGGCAAGCAT TACCGCATGG TCAGCGAGGC CCAACGCGAA
TATGCCGCAC GCGGCGGCAG CACCGGTATG TTCCCCTTCC CGATCGACCC GGACAGCACC
CTGGAAATCA GCCAGCACGC CAACGTCTAT GGCCCCAAGG ATGGCTACAG CTATAGCTCG
CCCGTGGGCA GTTACCCGGC CAACGCCTTT GGCGTGTACG ACATGCACGG CAATGTCTAC
GAATGGGTCG CAGACTGCTA CCACAACAGC TATGAAGGCG CCCCTGCCGA CGGCAGTGCC
TGGGGCCAGG CCAGCCGGGC CAAGGACAGC TGCAAGGTGG TAAGTATCCG TGGCAATGAC
TGGGGCGAGG CGCCGATCTT CTCCCGCTCC GGCAACCGCA ACACCAATTT CCCGGGCCGC
CTGGGTGACT GGCTGGGTGT GCGGGTGGTC CGCGACCTGT GA
|
|---|
| Protein sequence | MTASLHRLTL AGLLAACSLP ALAAQAANTP GTVFRDCDKL CPEMVVLPAG TFNMGTPADE
MGRQDDEGPQ HAVTFAKPFA ISRFQVTAEQ WDGYLEATGT RIADGDDRPG RRCTASKPSY
KQGPQQPAVC MSYHDVQDYV AWLSKKTGKH YRMVSEAQRE YAARGGSTGM FPFPIDPDST
LEISQHANVY GPKDGYSYSS PVGSYPANAF GVYDMHGNVY EWVADCYHNS YEGAPADGSA
WGQASRAKDS CKVVSIRGND WGEAPIFSRS GNRNTNFPGR LGDWLGVRVV RDL
|
|---|
| |