| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3534 |
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| Symbol | |
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| ID | 6112492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3894326 |
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| End bp | 3896290 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641623321 |
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| Product | ABC transporter related |
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| Protein accession | YP_001750386 |
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| Protein GI | 170722698 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.639834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTTC CCCTGATCGA GCTGCACGAC ATCCGCAAAT CCTACGGTGG TATCGACACC
CCCAAGGTCG ACGTACTGCG CGGCATCAGC CTGAGCATCC ACCCCGGCGA GTTCATCGCC
ATCGTCGGTG CGTCCGGTTC GGGCAAATCG ACGCTGATGA ACATCCTCGG CTGCCTCGAC
CGCCCCACCT CGGGCCACTA CCTGTTCACC GGCAGGGACG TGGCCCAGCT GGGCAGTGAC
GAACTGGCCT GGCTGCGCCG CGAAGCCTTT GGTTTCGTGT TCCAGGGCTA CCACCTGATC
CCTTCAGGCT CAGCCCAGGA AAACGTCGAG ATGCCGGCCA TCTACGCCGG CACCCCGCCC
GCCGCGCGCC ACGCCCGCGC CGCCGCCCTG CTTGAGCGCC TTGGCCTGGC CAGCCGTACC
GGCAACCGTC CGCATCAATT GTCCGGGGGC CAGCAGCAAC GCGTGTCGAT TGCCCGCGCG
CTGATGAATG GCGGCCATAT CATCCTTGCC GACGAGCCGA CCGGCGCCCT GGACAGCCAC
AGCGGTACCG AGGTCATGGC CCTGCTGGAC GAGCTGGCCA GCCAGGGCCA TGTGATCATC
CTGATCACCC ACGACCGCGA GGTGGCGGCG CGGGCACGCC GGGTGGTGGA AATCCGCGAC
GGGCTGATAA TTAGCGACTC GGCCTGCGAC CAGCCTCCCG CTGCTGCACA ACAAGGCCTG
CAGGCCGATG ACCTGCGCCA GCGCCTGGAC CGCGGCGCGA CCGTGCGTGG CGCATGGAAA
GGCGAGCTGC TCGAGGCCTT GCAGGCAGCG TGGCGGGTCA TGTGGATCAA CCGGTTCCGC
ACTGCCCTGA CATTGCTTGG CATCGTCATT GGCGTGGCTT CGGTCGTGGT CATGCTGGCC
GTGGGCGAAG GCAGCAAACG CCAGGTCATG GCACAGATGG CCGCGTTCGG CTCCAACATC
CTCTACCTCA ACGGTCGCCC GCCGACGCTG CGCGAGCCAG GCGGCATCGT CACCCTCGAT
GACGTCGCCG CCATCGCCGA ACTGCCCCAG GTTCGGCGCG TCATGCCGGT CATCGGCGGC
GACCTGATGG TGCGCCACGG CAACAACAAC CAGAGGTTCT ACGTTGGCGG CAACAACGTC
GAATTCCCCG CCATCCTCAA CTGGCCGGTC GTGCAGGGCA GCTTTTTCAG CGAAGCCGAC
GAACGCAGTG GCGCTGCCGT GGCGGTCATC GGCCAGAAAG TCCGCGACAA ACTGCTGGCA
CCCGGCACCG ACGCGCTGGG CCAGTACCTG CTGATCGGCA ACGTGCCGTT CCAGGTCGTC
GGCCTGCTCG CCGGCAAGGG CGCAAGTTCG GGTGACCAGA AGAGCGATGA GCGCATCGTG
GTGCCTTATT CCGCCGCTTC CATGCGCCTG TTCGGCAGCC ACGACCCGGA ATACGTGATC
ATCGCCGCAG CCGACTCGGC CCGAGTCGCC GAGACAGAAA CAGCGATCCA CCGCCTGATG
CGCAAGCGCC ATCAAGGCAA GGACGATTTC GAGCTGACCA ACGATGCGGC ACTGATCCAG
GCCGAGGCAC GCACACAAAA CAGCCTGTCG CTGATGCTCG GGGCGATCGC TGCGATCTCA
TTGCTGGTCG GCGGTATCGG CGTGATGAAC ATCATGCTCA TGACCGTGCG CGAGCGCACC
CGTGAAATCG GTATCCGCAT GGCCACCGGC GCACGCCAGC GCGATATCCT GCGCCAGTTC
CTCAGCGAGG CGGTCATGCT GTCGATGGTC GGCGGGTTGA CCGGCATCCT GCTGGCGCTG
CTGGTCGCAG GCGCGCTGAT ACTCGCCGAA GTCGCCGTGG CCTTCACCCT GCCCGCCATC
CTCGGCGCCT TCGGTTGCGC CGTCATCACC GGCGTGGTGT TCGGTTTCAT GCCAGCACGC
AAGGCAGCCC GACTCGATCC GGTCAAAGCC CTTACCAGCG AATAA
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| Protein sequence | MAVPLIELHD IRKSYGGIDT PKVDVLRGIS LSIHPGEFIA IVGASGSGKS TLMNILGCLD
RPTSGHYLFT GRDVAQLGSD ELAWLRREAF GFVFQGYHLI PSGSAQENVE MPAIYAGTPP
AARHARAAAL LERLGLASRT GNRPHQLSGG QQQRVSIARA LMNGGHIILA DEPTGALDSH
SGTEVMALLD ELASQGHVII LITHDREVAA RARRVVEIRD GLIISDSACD QPPAAAQQGL
QADDLRQRLD RGATVRGAWK GELLEALQAA WRVMWINRFR TALTLLGIVI GVASVVVMLA
VGEGSKRQVM AQMAAFGSNI LYLNGRPPTL REPGGIVTLD DVAAIAELPQ VRRVMPVIGG
DLMVRHGNNN QRFYVGGNNV EFPAILNWPV VQGSFFSEAD ERSGAAVAVI GQKVRDKLLA
PGTDALGQYL LIGNVPFQVV GLLAGKGASS GDQKSDERIV VPYSAASMRL FGSHDPEYVI
IAAADSARVA ETETAIHRLM RKRHQGKDDF ELTNDAALIQ AEARTQNSLS LMLGAIAAIS
LLVGGIGVMN IMLMTVRERT REIGIRMATG ARQRDILRQF LSEAVMLSMV GGLTGILLAL
LVAGALILAE VAVAFTLPAI LGAFGCAVIT GVVFGFMPAR KAARLDPVKA LTSE
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