| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3532 |
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| Symbol | |
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| ID | 6112490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3892466 |
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| End bp | 3892942 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641623319 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001750384 |
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| Protein GI | 170722696 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.997042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACATT ACTATCGCGA ATTGGTGAGC TTCCTTTCCG CGCGCCTGGG CAGCCGCCAG
GCCGCCGAAG ATGTGGCTCA CGATGCCTAT CTGCGGGTGC TCGAACGCAC CGGTACGCAG
CAGATCGAGC ACCCGCGCGC GTTCCTTTAC CGCACGGCGC TGAACCTTGT GATCGACCGT
CATCGCCGCC ACCTGCTGCG CCAGTCCGAA CCGCTGGAAG TGCTGGACCT GGACGAGCGC
TGGCACAGCC CGGCACCCAC CCAGAACATG CAACTGGATC AGCGCCTGGC GCTGATGCAG
AAGGCACTCG ATGAATTGAG CCAGCCCTGC CGTGACAGCT TCCTGTTGCG CAAGCTCGAA
GGCCTGTCGC ATCAGCAGAT CGCCGAGCAC CTGGGCATCT CGCGCAGCCT GGTGGAAAAG
CACATCGTCA ACGCCATGAA GCACTGCCGC GTGCGCATGC GCCAGTGGGA ATCCTGA
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| Protein sequence | MEHYYRELVS FLSARLGSRQ AAEDVAHDAY LRVLERTGTQ QIEHPRAFLY RTALNLVIDR
HRRHLLRQSE PLEVLDLDER WHSPAPTQNM QLDQRLALMQ KALDELSQPC RDSFLLRKLE
GLSHQQIAEH LGISRSLVEK HIVNAMKHCR VRMRQWES
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