| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3513 |
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| Symbol | sdhB |
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| ID | 6112471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3875534 |
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| End bp | 3876238 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641623300 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_001750365 |
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| Protein GI | 170722677 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.327963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAAG TCGAAGTTTA TCGCTACAAC CCGGATACCG ACTCGGCGCC CAAGATGGAG
TCGTTCGACG TCGATACCGG CGGCAAAGAC CTGATGGTGC TGGACGTGCT GGCGCTGATC
AAGGAGAAGG ACGAGGGCTT CTCGTACCGT CGCTCCTGCC GTGAAGGCGT TTGCGGTTCC
GATGGCATGA ACATGAACGG CAAGAACGGC CTGGCCTGCA TCACGCCGCT GTCCGGTGTG
GTCAAGGGTA ACAAGCTGGT TCTGCGCCCG CTGCCTGGCC TGCCGGTCAT TCGTGACCTG
GTCGTCGATA TGAGCATCTT CTACAAGCAG TACGAGAAGG TGAAGCCGTT CCTGCAGAAC
GACACTCCGG CTCCGGCCAT CGAGCGTCTG CAGTCGCCGG AAGATCGCGA CAAGCTGGAC
GGTCTGTACG AGTGCATCCT GTGCGCTTGC TGCTCGACCT CCTGCCCATC GTTCTGGTGG
AACCCGGACA AGTTCCTGGG CCCTGCTGCC TTGCTGCAGG CCTATCGCTT CCTGGCCGAC
AGCCGTGATA CCAAGACCCA GGAGCGCCTG GCGTCCCTGG ATGACCCGTT CAGCGTCTTC
CGCTGCCGCG GGATCATGAA CTGCGTCAAC GTTTGCCCGA AGGGTCTGAA CCCTACCAAG
GCAATCGGTC ACGTACGTAA CATGCTGCTG CAAAGCGGCA CCTGA
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| Protein sequence | MLKVEVYRYN PDTDSAPKME SFDVDTGGKD LMVLDVLALI KEKDEGFSYR RSCREGVCGS
DGMNMNGKNG LACITPLSGV VKGNKLVLRP LPGLPVIRDL VVDMSIFYKQ YEKVKPFLQN
DTPAPAIERL QSPEDRDKLD GLYECILCAC CSTSCPSFWW NPDKFLGPAA LLQAYRFLAD
SRDTKTQERL ASLDDPFSVF RCRGIMNCVN VCPKGLNPTK AIGHVRNMLL QSGT
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