Gene PputW619_3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3501 
Symbol 
ID6112459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3860599 
End bp3861324 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content62% 
IMG OID641623288 
Productdienelactone hydrolase 
Protein accessionYP_001750353 
Protein GI170722665 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.572778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.863924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGG TAATCGTCGA ATCGCTGGTT TATCACCTGT CCGGCAAGGC CTATGAAAGC 
CGTCTGGTGT ATGAGCCAGG TGCGCTGGGG CGACCGGGCC TGGTGATGGC GCCGAACTGG
ATGGGCATTG GCGAAGGTGC CGAGCGCATC GCCAAGGAAG TGGCCGAAAA AGGCTATGTG
GTGCTGATTG CCGACCTGTA CGGGCAATCG GTGCGTCCGT CCAATGCTGA CGAAGCCGGG
GCGGCGATGA TGCCGTTGAA GAATGACCGT GGCGAATTGC GCAAGCGCAT GAAGGAGGCG
TTGGCGCAGC TGCTGGCGCA GTCGAAGGCG TTACTGGAGC CTGGCAAGGT AGCAACCTTC
GGCTTCTGCT TTGGCGGCTG CTGCGCCCTG GAGCTGGCCC GTACCGGTGC AGACCTGAAG
GCTGCGGTGT CGTTCCATGG CACGCTGGAT ACCCCGAACC CTGAAGATGC CAAGCACATC
AAGGGCTCGG TGCTGGTGCT GCACGGCGCA TCCGACCCGC TGGTGCCGAG GGAGCAACTG
CCGGCGTTCG AGGAAGAGAT GAATGCGGCC AAGGTGGATT GGCAGCTGCT GAGCTATGGC
GGCGCGGTGC ACTCGTTCAC TGACCCGGGT GCCAATGTGC CGGGCAAGAT GCAGTATGAC
CGCCGTACCT CAGAGCGGGC GTTCCGTTCG ATGCACAATT TGCTCACCGA AGTGTTCCAG
CGCTGA
 
Protein sequence
MSKVIVESLV YHLSGKAYES RLVYEPGALG RPGLVMAPNW MGIGEGAERI AKEVAEKGYV 
VLIADLYGQS VRPSNADEAG AAMMPLKNDR GELRKRMKEA LAQLLAQSKA LLEPGKVATF
GFCFGGCCAL ELARTGADLK AAVSFHGTLD TPNPEDAKHI KGSVLVLHGA SDPLVPREQL
PAFEEEMNAA KVDWQLLSYG GAVHSFTDPG ANVPGKMQYD RRTSERAFRS MHNLLTEVFQ
R