Gene PputW619_3496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3496 
Symbol 
ID6112454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3854517 
End bp3856448 
Gene Length1932 bp 
Protein Length643 aa 
Translation table11 
GC content62% 
IMG OID641623283 
Productintegral membrane sensor hybrid histidine kinase 
Protein accessionYP_001750348 
Protein GI170722660 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAGAC GCCTGAGCTG GGATATCCAC ACCCGTACGC AGATCATAAG CCTAGGCCCT 
GCGCTGCTGC TGACATTGCT GCTGATCAGC TTCTTCACCT TCGTGCGCAT CCAGGACTTG
CGCCAGGAGC TCAACCATAC CGGTCAGTTG ATCGCCAATC AGTTGGCTCC AGCGTCCGAG
TACGGTGTGA TCTCGGGCAA CAACGAAGTG CTCGAAGGCC TGATGCGCGC CACCCTGAGC
ATCCCCCACG TGCGCTTTCT GGAAGTGCAG GACAGCCGCA ACCACATCCT GGTGTACGTC
GAGCAGTCAG ACGAGAGCGC TAACCGGGCA CAACGCGTAG AGGTGTTCCA GGCGCCGATC
CGGCTTCAGC AAATCCGCCT GGACAACGAC TTCCTGCAGC AGGGCAAAGC GCCGTCGCCG
GCAATCGGGG ACGATTATCT GGGGCGGGTG ATCGTCGGCA TGTCGGACGA CGCCTTCAGC
CAGCGCCAAC AGGAGATCGT TATCAAGGCT GGCATCCTGG CGCTGTTCGC CCTGTTGTTC
ACCTTCCTGC TCGCACGCCG CCTGGCCATG AGCCTCGCAA AGCCGATCAG CGACATGGGC
CATGCCGTCA AGGCCATCCA GCAAGGTGAC TACAACACCC CGCTGCCGGT GGTCGACGAC
AGCGAGCTGG GCCACCTGGC ACGCCACATC AACAACCTGG CCAGCGCACT GGAACAGGCC
AGCGCCGAAC AGAAACAGGC CATTGCCCAG TTGATTCAGG CCCGCGAGGA AGCCGAGCAG
GCCAACGGCG CCAAATCGGA ATTCCTGGCG ATGATGAGCC ACGAGTTGCG TACTCCCATG
AACGGCGTGC TGGGCATGCT GCAACTGCTC GAAACCACCC AGTTGACCAG CGAGCAAGCC
GAATACACGG CTGTGGCCAG CGAATCCACC GGGCACTTGC TCAAGGTGAT CAACGACATT
CTCGATTTCT CGCGGATCGA ACGCACCACA CTGCAACTGG AGCATATCGA CTTCAATCTC
GGCGAGCTGA TCGCCAGCAG CGTGCAGTCC TTCCAGCACA GCGCACAGCA ACGAGGCCTG
GATCTGCAGC TGCAATTACC GACCCAGAGC GAGCGGCTGC AGGTGGTGGG CGACCCGACA
CGCATCCGCC AAATCCTCCT CAACCTGGTC GGCAATGCCC TGAAGTTCAC TGAACGCGGC
CAGGTGCAGG TCGAGGCTCG GTGGCAGGCG CTCGATCGTC AGACCTTGTG GTTCACGTGC
AGCGTGCGCG ACACAGGTAT CGGCATCGAC AGCGAACGCC TGGAAATGAT GTTCGTCGCC
TTCCAGCAGG CCGACAGCTC GATTTCACGG CGCTATGGCG GTACTGGCCT GGGGCTGTCC
ATCGCTCGTA CCCTTGCTGA ACGCATGGGC GGCAAGCTGC GTGGCGAAAG CCACGAAGGG
CTGGGTTCGA CCTTCACCCT GGAAATGCCG CTCGCCCTGG CCAGCCCTGC GTCTGCGACA
TTGCCCGGCG CGCTGGCGGC TCACACACCG CTCGCCGAAG GCGAACGGAT CCTTTTGGTG
GAGGACAACC CGGTCAATCA GAGCGTTATC GAAGCCATGT TGCGCAGCCT GGGGCTGGAA
GTCAGCGTGG CCCATGACGG CATCCAGGCC GTTGAAAAGG TCAGCCAGCA GCACTTTGCG
GCCATACTGA TGGACTGCCG CCTGCCACAG GTCGATGGTT ATGAAGCCAC ACGACGCATA
CGCCTGCTGC CCAACGGCGG CAAGCTACCG ATCATCGCCT TGACCGCCAA CGCCCTGCAG
GGTGATCGGG AACGCTGCAT GGCCGCCGGC ATGGACGATT ACCTGAGCAA ACCGTTGCGC
CGCACTGACC TGCAGCAGGT GTTACAACGC TGGCTGCCCG GCCGGACAGT CGCGACTGGC
GATAAATGCT AA
 
Protein sequence
MTRRLSWDIH TRTQIISLGP ALLLTLLLIS FFTFVRIQDL RQELNHTGQL IANQLAPASE 
YGVISGNNEV LEGLMRATLS IPHVRFLEVQ DSRNHILVYV EQSDESANRA QRVEVFQAPI
RLQQIRLDND FLQQGKAPSP AIGDDYLGRV IVGMSDDAFS QRQQEIVIKA GILALFALLF
TFLLARRLAM SLAKPISDMG HAVKAIQQGD YNTPLPVVDD SELGHLARHI NNLASALEQA
SAEQKQAIAQ LIQAREEAEQ ANGAKSEFLA MMSHELRTPM NGVLGMLQLL ETTQLTSEQA
EYTAVASEST GHLLKVINDI LDFSRIERTT LQLEHIDFNL GELIASSVQS FQHSAQQRGL
DLQLQLPTQS ERLQVVGDPT RIRQILLNLV GNALKFTERG QVQVEARWQA LDRQTLWFTC
SVRDTGIGID SERLEMMFVA FQQADSSISR RYGGTGLGLS IARTLAERMG GKLRGESHEG
LGSTFTLEMP LALASPASAT LPGALAAHTP LAEGERILLV EDNPVNQSVI EAMLRSLGLE
VSVAHDGIQA VEKVSQQHFA AILMDCRLPQ VDGYEATRRI RLLPNGGKLP IIALTANALQ
GDRERCMAAG MDDYLSKPLR RTDLQQVLQR WLPGRTVATG DKC