| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3483 |
|---|
| Symbol | |
|---|
| ID | 6112441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 3838285 |
|---|
| End bp | 3840939 |
|---|
| Gene Length | 2655 bp |
|---|
| Protein Length | 884 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641623270 |
|---|
| Product | osmosensitive K+ channel signal transduction histidine kinase |
|---|
| Protein accession | YP_001750335 |
|---|
| Protein GI | 170722647 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACG CAGCCCGCGC AGACGCGCTG TTGGCCAACC TGCCGCGCGA AGGACGTGGC
AGGCTCAAGG TATTTCTCGG TGCAGCCCCC GGCGTAGGCA AGACCTACGC CATGTTACAA
GCCGCCCACG CCCAACAGCG CCAGGGCGTG CAGGTACTGG CAGGCGTAGT CGAAACCCAC
GGCCGCGCCG AAACCGAATC ACTCCTCTCT GGCCTGGTCC AGCAACCTTT GCTACGCAGC
GAATACCGGG GTGTCACCCT GGAGGAAATG GACCTTGACG GCCTGCTGAA AGCCGCCCCC
GGCTTGGCCC TTGTCGATGA ACTCGCCCAC AGCAACGCCC CGGGCAGCCG CCACGCCAAA
CGCTGGCAAG ACGTTCAGGA ACTGTTGGCC GCCGGAATCG ACGTGTACAC CACGGTCAAC
GTCCAGCACC TGGAAAGCCT CAACGACAAG GTGCGCGACA TCACTGGCGT GCACGTGCGT
GAAACGCTGC CGGACTGGGT GCTGCAGGAG TCTTTCGAGC TGGTGCTGAT CGACCTGCCG
CCACGCGAGC TGCTCGAACG TCTGCGTGAG GGCAAAGTCT ACGTGCCCGA GCAGGCTCGG
GCTGCGATCG ATGCCTATTT TTCCCAGACC AACCTCACCG CGTTGCGTGA GCTGGCCATG
CAGGCCGCCG CCGCGCAGGT CGATGCCGAC CTGGCCCACG GTTATCGTCA GCGTGGCCAA
GAGGCGCCGG CCCTGCGCGG GCGTCTGCTG GTGGGTGTCG ATGGTGACGA TCAGGCCGAA
CGCCTGGTGC GCCATGCCAG CCGGGTTGCG CAGCGTCGGC ATTTGCCCTG GAGCCTGGTG
CATGTGGACA ACGGGCGGCT GCGCGACGAA ACCGCACGGC AGCGTTTGCA GGCGGCCCAA
CAACTGGCTG AGCGCCTGGG CGGGGAAGTG GTCCTGCTGC GCGCAGGCGA GGTGGCACGC
ACGCTGATCC AGCATGCCGG CGAGCGCCGA GCCAGCCTGG TGCTGGTGGG TCAGTCCCGG
GACCGCCTGC GTCGTCGACT GTTCGGCGCA GGCGTGGCTG CCCGGTTGCT GCGCGAAAGC
CACGGGCTTG AGATCAACGT GCTCGACCGC GATGCCCAAC CGGCCCCCGC AAGTTCGGCC
GTGCGACGGG TGTGGATATG GCGCCACTAT CTGTTGGCAC TGGCCGCGAC CGCGCTGGCG
ACGGGGTTGT CCTGGGCGGT GTCGAGCGTG TTGGCGCTGC CCAATATTTC GCTGGTTTTC
CTTGCCGCCG TACTTCTGGT CGCGGTGCGC AGCAGCCTGG GCCCGGCCTT GGCCTGTGCT
GCCTTGTCAT TCCTGACCTA CGACTTCTTG TTCATCCCGC CGAATTTCTC CTTCAGCATT
CAGCGCGAAG AAGACGTGCT GACACTGGTG TTTTTCCTGT TGATGGCTGC GCTTACCGGC
AACCTCGCTG CGCGTCAGCG CCGCCAGTTG CAGGCCCTTC GCGAAACCCA GGCGCAAACC
AACCAGTTGC TCGACCTGTC GCGACGGCTT ACGGTCGCCA CCGACCGGCA AGCCGTATTC
AACGCCGCCG GCCAGCACCT CAACGGCTGG CAGGACGTGC ACGTCTGCCT GCTCGAACGC
AACCCCGAAG GGCAGTTACA AGTGGCCAGC GGCCAAGCCC AGGCCTTGAG CGACAACGAG
CGCGCCGCCG CCGAATGGGC CTGGCAACAT GGGCAGGCCG CCGGCCATGG CAGCGACACC
CTGCCTGATG GCAGATGGTG GTGGTGGCCG TTGACCGTCG ACGATCATCC CCTGGCCATG
CTCGGCGTAC GCCCCCAGTC CGGCGACCCT CTCAGTGCCC AGCGGCGCCG GCTGCTCATG
GCGCTTGGTC AACCGCTGGC CCAGGCCCTC GCTCGGGCTC GCCTGGCCGA GCAACTGGAA
GCCGCCCGCC TGCACGGCGA GACCGAGCAG TTGCGCAGCG CGTTGCTGGC CTCTGTCTCC
CACGACTTGC GTACTCCGCT GACCGCCATG CGTGGCAGTA TCGACAGCCT GCTGGCGCTG
GGCGAAGCCA TCCCCACCGA AGACCGCCGC GAGCTGTTGG AGGGTACCCG CAACGAAGCC
GAACGCCTTG ACCGCTATAT CCAGAACCTG CTCGACATGA CCCGTCTGGG CCATGGCGGT
CTCAAGCTGG CCCGCGACTG GGTCGCCCCT GCCGATATCG TCGGCAGTGC CCTGAACCGC
CTACGCGTAG TGCTCGCGCC CCTGCGCGTG CACACCGACG TGCCCGCTGA GTTGCCGTTG
CTGTTCGTGC ACGCCGCGCT GATCGAGCAG GCGCTGATCA ACGTGCTGGA GAACGCAGCG
CGCTTTTCAC CCGCCCAAGG CCGCCTCGAA CTGCAGGTGT CGGTGCACGA CGAGCAATTG
CGGTTCGCGG TCAGCGACCA AGGGCCTGGC ATCCCCGTGC CTGAACGCGA GAAAATCTTC
GACATGTTTT ACACCGCGGC CCGCGGCGAC CGCGGCGGGC AGGGCACCGG CCTGGGCCTG
GCGATCTGTC AAGGCATGAT CGGCGCCCAT GGTGGGCAGA TTCTGGTCAG CGAAGGCATC
GATGGCCTTG GTACCTGCAT CACTTTATGC TTGCCCTTGC CCCAACAACC CGAAGCCGAA
AGCGAAACCC CATGA
|
|---|
| Protein sequence | MSDAARADAL LANLPREGRG RLKVFLGAAP GVGKTYAMLQ AAHAQQRQGV QVLAGVVETH
GRAETESLLS GLVQQPLLRS EYRGVTLEEM DLDGLLKAAP GLALVDELAH SNAPGSRHAK
RWQDVQELLA AGIDVYTTVN VQHLESLNDK VRDITGVHVR ETLPDWVLQE SFELVLIDLP
PRELLERLRE GKVYVPEQAR AAIDAYFSQT NLTALRELAM QAAAAQVDAD LAHGYRQRGQ
EAPALRGRLL VGVDGDDQAE RLVRHASRVA QRRHLPWSLV HVDNGRLRDE TARQRLQAAQ
QLAERLGGEV VLLRAGEVAR TLIQHAGERR ASLVLVGQSR DRLRRRLFGA GVAARLLRES
HGLEINVLDR DAQPAPASSA VRRVWIWRHY LLALAATALA TGLSWAVSSV LALPNISLVF
LAAVLLVAVR SSLGPALACA ALSFLTYDFL FIPPNFSFSI QREEDVLTLV FFLLMAALTG
NLAARQRRQL QALRETQAQT NQLLDLSRRL TVATDRQAVF NAAGQHLNGW QDVHVCLLER
NPEGQLQVAS GQAQALSDNE RAAAEWAWQH GQAAGHGSDT LPDGRWWWWP LTVDDHPLAM
LGVRPQSGDP LSAQRRRLLM ALGQPLAQAL ARARLAEQLE AARLHGETEQ LRSALLASVS
HDLRTPLTAM RGSIDSLLAL GEAIPTEDRR ELLEGTRNEA ERLDRYIQNL LDMTRLGHGG
LKLARDWVAP ADIVGSALNR LRVVLAPLRV HTDVPAELPL LFVHAALIEQ ALINVLENAA
RFSPAQGRLE LQVSVHDEQL RFAVSDQGPG IPVPEREKIF DMFYTAARGD RGGQGTGLGL
AICQGMIGAH GGQILVSEGI DGLGTCITLC LPLPQQPEAE SETP
|
|---|
| |