Gene PputW619_3477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3477 
Symbol 
ID6112435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3829025 
End bp3829987 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content64% 
IMG OID641623264 
Productfec operon regulator FecR 
Protein accessionYP_001750329 
Protein GI170722641 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTT CGCCCGCCGA GTTGCAGGCC ATCAGTGCAG CCGCCCGCTG GTACGCGAGC 
CTGCAGTCTG GCATCGCCAC CGACGCCGAT CGCAGCGCCT GGAACGACTG GCTGGCTGCC
GACCCTGTCC ATCGCCAAGC CTGGCAGCGG ATGACCGCTG TGGGTGAGCA GATGGCAAGC
GTGCCGGCCG CGCTGGCCGC ACCGGCCCTG CGCGGAGCCG CCCGTTCCCG CCGGCAACTG
TTACGCAGCG TAGTGGTATT GGTGCCAGCC ACCTCACTGG GCTGGCTGGG GTGCAATAGC
AACAGCTCGC AACAGCTGTT TGCCGATTAC CGCACCGCAG TGGGTGAGCG CCGTGCCTTT
CGTTTGGCCG ATGGCAGTTC ACTGCTGCTC AACACCGACA CTTCTGTAAA CCTCAAGTAC
GACGGCCAGC AACGGGTGCT GGAACTGCTC CGCGGTGAAA TTCTGGTGTC GACGGCTACC
GACCCAGCAC AGCGACCATT CAAGGTAAGC ACCACTCATG GCGAGGTCCG GGCGCTGGGC
ACGCGCTTTA TCGTTCGCAC ACAAGCGCTG GGCGGTGAGG TGGCAGTCCT GGAGAAAGCG
GTAGAAGTCA GAGCGTCCAG CAGCCCATTG ACAGTGCGCG TTGAGGCCGG GCAATCCATC
GCCTTCACCG ACCTCACGAT GGGGCAGCTA CGCCGTAATG ACGCTACGGT GGGCGCCTGG
CAACACGGCA GCATCATTGC CCTTGATCGC CCCCTGGTCG AACTGCTTTC CGACCTGTCG
CGCTACCGCA CCGGCGTACT GCGCTGTGAT CCGCGAATTG CGCACCTGAG GGTCTCCGGC
TCGTTTCCAA TCGATGACAC CGACCTGGCG TTGGCGGCGC TGGAAAGCGG GCTTTCATTA
CGCGTCACGC GTTACAGCCG TTTCTGGGTC ACTGTGTCGC CTCCTGCCGT CCCGCCTCAG
TAA
 
Protein sequence
MSLSPAELQA ISAAARWYAS LQSGIATDAD RSAWNDWLAA DPVHRQAWQR MTAVGEQMAS 
VPAALAAPAL RGAARSRRQL LRSVVVLVPA TSLGWLGCNS NSSQQLFADY RTAVGERRAF
RLADGSSLLL NTDTSVNLKY DGQQRVLELL RGEILVSTAT DPAQRPFKVS TTHGEVRALG
TRFIVRTQAL GGEVAVLEKA VEVRASSSPL TVRVEAGQSI AFTDLTMGQL RRNDATVGAW
QHGSIIALDR PLVELLSDLS RYRTGVLRCD PRIAHLRVSG SFPIDDTDLA LAALESGLSL
RVTRYSRFWV TVSPPAVPPQ