| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3473 |
|---|
| Symbol | |
|---|
| ID | 6112431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 3824466 |
|---|
| End bp | 3825539 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641623260 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001750325 |
|---|
| Protein GI | 170722637 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCCT ACATCCTGCG TCGCCTGCTG CTGATCATCC CGACTCTGTT CGGCATCCTG
GTGATCAACT TCATCATCGT CCAGGCCGCC CCCGGCGGCC CCGTGGAACA GATGATCGCC
AAGCTCGAAG GCTTCGAGGG CGCCACCAGC CGGATCGCCG GCGGCGGCGC CGAAGTCTCC
GTGGCCGGCT CCAACTACCG CGGCGCCCAG GGCCTCGACC CGGCGCTGAT CGCAGAAATC
GAGCGCATGT ACGGCTTCGA CAAGTCGCCC CCCGAGCGCT TGTGGATCAT GGTAAAGAAC
TACGCCCAGC TGGATTTCGG CGAGAGTTTC TTCCGTGATG CCAAGGTCAT CGACCTGATC
GCCGAGAAGA TGCCGGTTTC GATTTCGCTC GGGCTGTGGA GCACGTTGAT CATGTACCTG
GTGTCGATCC CCCTGGGCAT CGCCAAGGCG GTGCGCCACG GCAGCCACTT CGACGTCTGG
ACCAGCTCGG CGATCATCGT CGGCTATGCC ATCCCGGCGT TCCTGTTCGC CATCCTGCTG
ATCGTGCTGT TCGCTGGAGG CAGCTACTTC GACTGGTTCC CGCTGCGCGG CCTGACCTCG
AACAACTTCG ACGAGCTGTC CACGGCCGGC AAGGTGCTCG ACTACTTCTG GCACCTGGTG
CTGCCGATCA CCGCCCTGGT GATCGGCAAC TTCGCCACCA TGACCCTGCT GACCAAGAAC
AGTTTTCTCG ACGAGATCAA CAAGCAGTAC GTGGTCACCG CCAAAGCCAA AGGCCTGAGC
CGCTCACGGG TGTTGTACGG CCACGTGTTC CGTAACGCCA TGCTGTTGGT GATCGCGGGC
TTCCCTTCGG CGTTCATCGG CATCTTCTTC ACCGGTTCCC TGCTGATCGA GGTGATTTTC
TCCCTCGACG GCCTGGGCCT TATGAGCTTC GAGGCGGCCA TCAACCGCGA CTACCCGGTG
GTGTTCGGCA CCCTGTTCAT CTTCACCCTG CTCGGGCTGG TGGTGAAACT GATCGGCGAC
CTCACCTACA CCTTGGTCGA TCCACGCATC GACTTCGCCA GCCGGGAGCA CTGA
|
|---|
| Protein sequence | MLAYILRRLL LIIPTLFGIL VINFIIVQAA PGGPVEQMIA KLEGFEGATS RIAGGGAEVS
VAGSNYRGAQ GLDPALIAEI ERMYGFDKSP PERLWIMVKN YAQLDFGESF FRDAKVIDLI
AEKMPVSISL GLWSTLIMYL VSIPLGIAKA VRHGSHFDVW TSSAIIVGYA IPAFLFAILL
IVLFAGGSYF DWFPLRGLTS NNFDELSTAG KVLDYFWHLV LPITALVIGN FATMTLLTKN
SFLDEINKQY VVTAKAKGLS RSRVLYGHVF RNAMLLVIAG FPSAFIGIFF TGSLLIEVIF
SLDGLGLMSF EAAINRDYPV VFGTLFIFTL LGLVVKLIGD LTYTLVDPRI DFASREH
|
|---|
| |