| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3457 |
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| Symbol | |
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| ID | 6112415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3806166 |
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| End bp | 3806933 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641623244 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001750309 |
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| Protein GI | 170722621 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.413022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.576947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATCG CCAACAAACA CTTTATCGTC AGCGGCGCAG CTTCAGGGCT GGGTGCTGCC
ACTGCGCAGA TGCTGGTCGA GGCCGGCGCC AAGGTCATGC TGGTTGACCT CAATGCCCAG
GCTGTCGAGG CCAAGGCCCG CGAGCTGGGT GACAACGCCC GCTTTGCGAT CGCCGACATC
AGCGACGAGC AAGCGGCCCA GGCCGCCGTC GATGCCGCTG TAACGGCTTT TGGCAGCCTG
CACGGGCTGG TCAATTGTGC GGGCATCGTC GGTGCCGAAA AAGTGCTGGG CAAACAAGGG
CCACACGGCC TGGCCAGTTT CGCCAAGGTC ATCAACGTCA ACCTGGTCGG TAGCTTCAAC
CTGCTGCGCC TGGCTGCTGC TGCGATGGCC GAAGGCGTTG CCGACGAAAG CGGCGAGCGC
GGGGTGATCA TCAATACCGC CTCGATCGCC GCCTATGACG GTCAGATAGG CCAGGCTGCC
TACGCCGCCT CCAAGGGCGC CATCGCCAGC CTGACATTGC CGGTTGCCCG CGAGCTGGCG
CGTTACGGCA TTCGTGTGAT GACCATCGCC CCGGGTATTT TCGAAACCCC GATGATGGCC
GGCATGACCG AAGAGGTACG TACTTCGCTG GCTGCCGGTG TGCCGTTCCC GCCGCGCCTG
GGCCGCCCGC AGGAATACGC GGCGCTGGCC CGACACATCA TCGAGAACAG CATGCTCAAC
GGCGAGGTGA TCCGCCTCGA CGGCGCACTG CGCATGGCTG CCAAATAA
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| Protein sequence | MHIANKHFIV SGAASGLGAA TAQMLVEAGA KVMLVDLNAQ AVEAKARELG DNARFAIADI
SDEQAAQAAV DAAVTAFGSL HGLVNCAGIV GAEKVLGKQG PHGLASFAKV INVNLVGSFN
LLRLAAAAMA EGVADESGER GVIINTASIA AYDGQIGQAA YAASKGAIAS LTLPVARELA
RYGIRVMTIA PGIFETPMMA GMTEEVRTSL AAGVPFPPRL GRPQEYAALA RHIIENSMLN
GEVIRLDGAL RMAAK
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