Gene PputW619_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3454 
Symbol 
ID6112412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3803038 
End bp3803811 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content60% 
IMG OID641623241 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001750306 
Protein GI170722618 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.73615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.177072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCG AAACCATCCT GTTGGATATT CACGACAAGG TCGGCCTGAT TACCCTGAAC 
CGGCCCCAGG CGCTCAATGC GCTCAACGCA CAGATCGTCA GTGAGATCAA TCAGGCCCTG
GACCAGCTCG AGCGTGACCC GAATATCGGC TGCGTAGTGC TGACCGGTTC GGCCAAAGCC
TTTGCCGCCG GTGCCGATAT CAAGGAAATG GCTGAGCTCA AATACCCGCA GATCTACGTC
GATGACCTGT TCAGTGATGC CGACCGCATT GCCAATCGCC GCAAGCCGAT CATCGCTGCG
GTATCGGGTT TTGCCTTGGG CGGTGGTTGT GAGCTGGCGA TGATGTGCGA CTTCATTCTG
GCGGCCGACA ATGCAAAGTT CGGGCAGCCG GAAATCAACC TGGGCGTACT GCCAGGCATG
GGCGGTACCC AGCGCCTGAC CCGGGCCGTG GGCAAGGCCA AAGCCATGGA GCTGTGCCTG
ACGGGGCGTC TGATGGGGGC TGAGGAGGCG GAGCGTGCAG GCCTCGTTGC GCGCGTGGTG
CCACAGGCCG AACTGGTCGA GGAGGCATTG AAGGTGGCTG CGACCATTGC TGGTAAGTCG
ATCCCGGTGA GCATGATGGT CAAGGAGAGC GTCAACCGGG CCTTTGAAGT CACGCTGAGC
GAAGGTGTGC GTTTCGAGCG TCGTGTGTTT CATGCGGCAT TTGCCACTGA AGACCAGAAG
GAGGGGATGG CCGCCTTCAT TGCCAAGCGC GAGGCTCAAT TCAAGGACTG CTGA
 
Protein sequence
MAFETILLDI HDKVGLITLN RPQALNALNA QIVSEINQAL DQLERDPNIG CVVLTGSAKA 
FAAGADIKEM AELKYPQIYV DDLFSDADRI ANRRKPIIAA VSGFALGGGC ELAMMCDFIL
AADNAKFGQP EINLGVLPGM GGTQRLTRAV GKAKAMELCL TGRLMGAEEA ERAGLVARVV
PQAELVEEAL KVAATIAGKS IPVSMMVKES VNRAFEVTLS EGVRFERRVF HAAFATEDQK
EGMAAFIAKR EAQFKDC