| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3415 |
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| Symbol | |
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| ID | 6112368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3757538 |
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| End bp | 3758794 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641623198 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001750268 |
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| Protein GI | 170722580 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.174828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATACC AGAAAATCAA GGTTCCGACC GACGGCGCCA AGATCACCGT CAATGCAGAC
CATTCGCTCA ATGTGCCCGA CAACCCCATC ATTCCCTATA TCGAAGGCGA CGGCATTGGT
GTCGATGTCT CACCGGTAAT GATCAAAGTG GTGGATGCTG CCGTGCAGAA AGCGTACGGC
GGCAAGCGCA AGATCGCCTG GATGGAGGTG TATGCAGGGG AGAAGGCCAC CCAGGTTTAT
GACCAGGACA CTTGGTTGCC CCAGGAGACC CTGGATGCGG TGCGCGACTA CGTCGTATCG
ATCAAGGGGC CGCTTACCAC CCCGGTCGGC GGGGGCATCC GTTCATTGAA CGTGGCACTG
CGCCAGCAAC TTGACCTCTA TGTGTGTCTG CGGCCAGTGC TGTGGTTCGA GGGCGTGCCC
AGCCCGGTCA AGAAGCCCGG CGATGTCGAC ATGGTGATTT TCCGCGAGAA TTCCGAGGAC
ATCTACGCCG GCATCGAATG GAAAGCCGGC TCGCCCGAGG CGAACAAGGT TATCAAGTTC
CTCAAAGAGG AAATGGGCGT CACCAAGATC CGTTTCGACC AGGACTGCGG CATCGGCGTC
AAGCCGGTTT CCCGAGAGGG AACCAAGCGC CTGGTACGCA AGGCCCTGCA ATACGTGGTG
GACAACGACC GTGAGTCGCT GACCCTGGTG CACAAGGGCA ACATCATGAA GTTCACCGAA
GGTGCCTTCA AAGACTGGGG TTACGAGGTG GCCAAGGATG AGTTTGGCGC CGAGCTGCTC
GATGGTGGCC CATGGATGAA GTTCAAGAAC CCTAAGACCG GCCGCGAGGT GATCGTCAAG
GACGCCATTG CCGACGCCAT GCTTCAGCAG ATCCTGCTGC GCCCGGCTGA GTATGATGTG
ATTGCCACCC TCAACCTCAA CGGCGACTAC CTGTCCGATG CGCTGGCGGC GGAAGTGGGT
GGGATCGGTA TCGCGCCAGG CGCCAACCTG TCCGACACCG TGGCCATGTT CGAGGCCACC
CACGGCACTG CGCCCAAGTA TGCCGGCCAG GATAAGGTCA ACCCGGGCTC GGTGATCCTC
TCGGCAGAGA TGATGCTGCG CCACATGGGC TGGACCGAAG CGGCCGACCT GATCATCAAA
GGCACCAATG GCGCGATCGG GGCCAAAACG GTTACCTACG ACTTCGAGCG GCTGATGGAA
GGCGCGAAGC TGGTGGGTAG CTCAGGCTTC GGGGACGAAA TGATCAAGCA TATGTGA
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| Protein sequence | MGYQKIKVPT DGAKITVNAD HSLNVPDNPI IPYIEGDGIG VDVSPVMIKV VDAAVQKAYG
GKRKIAWMEV YAGEKATQVY DQDTWLPQET LDAVRDYVVS IKGPLTTPVG GGIRSLNVAL
RQQLDLYVCL RPVLWFEGVP SPVKKPGDVD MVIFRENSED IYAGIEWKAG SPEANKVIKF
LKEEMGVTKI RFDQDCGIGV KPVSREGTKR LVRKALQYVV DNDRESLTLV HKGNIMKFTE
GAFKDWGYEV AKDEFGAELL DGGPWMKFKN PKTGREVIVK DAIADAMLQQ ILLRPAEYDV
IATLNLNGDY LSDALAAEVG GIGIAPGANL SDTVAMFEAT HGTAPKYAGQ DKVNPGSVIL
SAEMMLRHMG WTEAADLIIK GTNGAIGAKT VTYDFERLME GAKLVGSSGF GDEMIKHM
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