Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3404 |
Symbol | |
ID | 6112357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3746079 |
End bp | 3747359 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641623187 |
Product | seryl-tRNA synthetase |
Protein accession | YP_001750257 |
Protein GI | 170722569 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.25013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATT CCAAACTGTT ACGCGGCCAA CTTCAGGAAG TGGCGGACCG CCTCGCCTCC CGTGGCTTCA GCCTGGATGT CGCGCGCATC GAATCGCTGG AAGAGCGCCG CAAGGCGGTG CAGACCCGCA CCGAGCAGCT GCAGGCCGAG CGTAACGCCC GCTCCAAATC GATCGGCCAG GCCAAAGCCA AGGGCGAGGA CATCGCGCCG CTGATGGCTG ATGTCGAGCG CATGGCCAAT GAGCTGGCCG CTGGCAAGGT CGAGCTGGAC GGCATCCAGG CCGAACTGGA TGGCATTGTC CTGACCATCC CCAACCTGCC GGACGCCAGC GTGCCGGTCG GTGCCAGTGA GGACGACAAC GTCGAAGTGC GCCGTTGGGG CACCCCGAGG GCATTCGATT TTGCAATCAA GGACCACGTC GCCCTGGGCG AGATCAGCGG TGGCCTGGAC TTCGAAGCAG CTGCCAAGCT GTCGGGCGCC CGCTTTGCCG TGCTGCGCGG CCCGATTGCC CGCCTGCACC GTGCCCTGGC GCAGTTCATG ATCAACCTGC ACACCGGTGA GCATGGCTAC GAAGAACACT ACACCCCGTA CCTGGTCCAG GCTCCGGCCT TGCAGGGCAC CGGCCAGTTG CCGAAATTCG AGGAAGACCT GTTCAAGATC ACCCGCGAAG GCGAAGCCGA CTTCTACCTG ATCCCGACCG CTGAAGTGTC GCTGACCAAC CTGGTGGCCG GCGAGATTAT CGACGCCAAG CAGCTGCCGC TCAAGCTGGT CGCCCACACC CCGTGCTTCC GCAGTGAAGC TGGCGCTTCG GGCCGTGACA CGCGCGGCAT GATCCGCCAG CACCAGTTCG ACAAGGTCGA GATGGTGCAG GTGGTCGAGC CGTCCAAGTC CATGGAAGCC CTGGAAGGCC TCACCGCCAA CGCCGAGCGC GTGTTGCAGC TGCTGGAACT GCCCTACCGC GTACTGGCCC TGTGCACCGG TGACATGGGC TTCGGCGCCG TGAAGACCTA CGACCTGGAA GTGTGGGTGC CGAGCCAGGA CAAGTACCGC GAGATCAGCT CCTGCTCCAA CTGTGGTGAC TTCCAGGCGC GCCGCATGCA GGCCCGCTGG CGCAACCCGG AAACCGGCAA GCCGGAGCTG GTGCATACCC TCAATGGCTC GGGCCTGGCT GTAGGCCGTA CCCTGGTCGC TGTGCTGGAA AACTACCAGC AGGCTGATGG CTCCATTCGT GTGCCGGAAG TGCTCAAGCC CTACATGGGC GGTGTCGAGG TCATCCGCTA A
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Protein sequence | MLDSKLLRGQ LQEVADRLAS RGFSLDVARI ESLEERRKAV QTRTEQLQAE RNARSKSIGQ AKAKGEDIAP LMADVERMAN ELAAGKVELD GIQAELDGIV LTIPNLPDAS VPVGASEDDN VEVRRWGTPR AFDFAIKDHV ALGEISGGLD FEAAAKLSGA RFAVLRGPIA RLHRALAQFM INLHTGEHGY EEHYTPYLVQ APALQGTGQL PKFEEDLFKI TREGEADFYL IPTAEVSLTN LVAGEIIDAK QLPLKLVAHT PCFRSEAGAS GRDTRGMIRQ HQFDKVEMVQ VVEPSKSMEA LEGLTANAER VLQLLELPYR VLALCTGDMG FGAVKTYDLE VWVPSQDKYR EISSCSNCGD FQARRMQARW RNPETGKPEL VHTLNGSGLA VGRTLVAVLE NYQQADGSIR VPEVLKPYMG GVEVIR
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