Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3395 |
Symbol | |
ID | 6112348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3738862 |
End bp | 3739533 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641623178 |
Product | hypothetical protein |
Protein accession | YP_001750248 |
Protein GI | 170722560 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.912483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.775889 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGAAC AGGATTATGC CGTACACAGC GGCCAACAGG TCGAGCAGCG CGAGGTCAGC AAGGTCCTGC GCAACACCTA CAGCCTGCTG GCACTCACCC TCGCCTTCAG CGGTGTTATG GCTTTCGTTG CCCAGCAGAT GCGTGTCGGC TACCCGAACA TCTTCGTGGT GCTGATCGGC TTCTACGGCC TGTTCTTCCT CACCAACAAA CTGCGTGATT CGGTCTGGGG CCTGGTTTCC ACCTTCGCTC TCACCGGCTT CATGGGCTTC ATCCTCGGCC CAATCCTCAA CCGTTACCTG GGCATGGCCG GTGGCGCTGA GGTGGTCAGC TCGGCCTTCG CCATGACGGC CCTGGTGTTC GGTGGCCTGT CGGCCTATGT GCTGATTTCT CGCAAGGACA TGAGCTTCCT CAGCGGTTTC ATCACCGCCG GCTTCTTCGT CCTGCTGGGC GCCGTAGTGG CCAGCTTCTT CTTCCAGATC AGCGGCCTGC AACTAGCGAT CAGCGCTGGC TTCGTGCTGT TCTCGTCGGT CTGCATCCTG TTCCAGACCA GCGCGATCAT CCACGGCGGT GAGCGTAACT ACATCATGGC GACCATCAGC CTGTATGTAT CGATCTACAA CCTGTTTGTC AGCTTGCTGC AACTGTTCGG CATCATGGGT CGCGACGACT GA
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Protein sequence | MREQDYAVHS GQQVEQREVS KVLRNTYSLL ALTLAFSGVM AFVAQQMRVG YPNIFVVLIG FYGLFFLTNK LRDSVWGLVS TFALTGFMGF ILGPILNRYL GMAGGAEVVS SAFAMTALVF GGLSAYVLIS RKDMSFLSGF ITAGFFVLLG AVVASFFFQI SGLQLAISAG FVLFSSVCIL FQTSAIIHGG ERNYIMATIS LYVSIYNLFV SLLQLFGIMG RDD
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