| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3389 |
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| Symbol | |
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| ID | 6112341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3732720 |
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| End bp | 3734045 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641623171 |
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| Product | isocitrate lyase |
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| Protein accession | YP_001750242 |
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| Protein GI | 170722554 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.580592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTGA CACGCGAACA GCAAATTGCA GCCCTCGAGA AAGACTGGGC CGAAAACCCG
CGCTGGAAAG GCGTGACCCG TACCTACACC GCCGCCGATG TCGTTCGCCT GCGTGGCTCC
CTGCAGCCGG AGCACACCCT GGCCCGCCTG GGTGCAGAAA AACTGTGGAA GCTGGTCACC
GAGGGTGCCC ACCCGTCCTT CCGCCCAGAA AAAGATTTCG TCAACTGCAT GGGCGCCCTG
ACCGGCGGCC AGGCAGTGCA GCAGGTCAAG GCCGGCATCC AGGCCATCTA CCTGTCTGGC
TGGCAGGTGG CCGCCGACAA CAACTCGGCC GAGTCCATGT ACCCTGACCA GTCGCTGTAC
CCGGTCGACT CCGTACCGAC TGTGGTCAAG CGCATCAACA ACTCGTTCCG CCGCGCCGAC
CAGATCCAGT GGAAAGCCGG CAAGAACCCG GGCGACGAAG GCTACATCGA CTACTTCGCG
CCAATCGTAG CGGACGCTGA GGCCGGTTTC GGCGGCGTGT TGAACGCCTA CGAACTGATG
AAGAACATGA TCGAAGCGGG CGCCGCCGGC GTGCACTTCG AAGACCAGCT GGCCTCGGTG
AAAAAGTGTG GCCACATGGG CGGCAAGGTC CTGGTACCTA CCCAGGAAGC CGTGCAGAAG
CTGGTTGCAG CGCGCCTGGC CGCTGACGTA TCGGGCGTAC CGACCATCAT CCTGGCCCGC
ACCGACGCCA ACGCCGCCGA CCTGCTGACC AGCGACTGCG ACCCGTACGA CCAGCCGTTC
GTGATCGGTG AGCGTACCCG TGAAGGCTTC TACAAGGTCC GCGCCGGCCT CGACCAGGCC
ATCGCCCGCG GCCTTGCCTA CGCGCCATAC GCCGACCTGA TCTGGTGCGA AACCGCCAAG
CCAGACCTGG ACGAAGCACG CCGCTTCGCC GAAGCGATCA AGAAGGAATA CCCGGACCAA
CTGCTGTCGT ACAACTGCTC GCCTTCCTTC AACTGGAAGA AAAACCTGGA CGACGCCACC
ATCGCCAAAT TCCAGCGCGA GCTGTCGGCC ATGGGCTACA AACACCAGTT CATCACCCTG
GCTGGTATCC ACAACATGTG GCACGGCATG TTCAACCTGG CGCACGACTA CGCCCGCAAC
GACATGACCG CCTACGTGAA GCTGCAGGAG CAGGAATTCG CCGACGCCAG CAAAGGCTAC
ACCTTCGTGG CGCACCAGCA GGAAGTGGGC ACCGGCTACT TCGACGACAT GACCACCGTG
ATTCAGGGTG GCGCATCCTC GGTGACGGCA CTGACCGGTT CGACCGAGGA AGAGCAGTTC
CACTGA
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| Protein sequence | MALTREQQIA ALEKDWAENP RWKGVTRTYT AADVVRLRGS LQPEHTLARL GAEKLWKLVT
EGAHPSFRPE KDFVNCMGAL TGGQAVQQVK AGIQAIYLSG WQVAADNNSA ESMYPDQSLY
PVDSVPTVVK RINNSFRRAD QIQWKAGKNP GDEGYIDYFA PIVADAEAGF GGVLNAYELM
KNMIEAGAAG VHFEDQLASV KKCGHMGGKV LVPTQEAVQK LVAARLAADV SGVPTIILAR
TDANAADLLT SDCDPYDQPF VIGERTREGF YKVRAGLDQA IARGLAYAPY ADLIWCETAK
PDLDEARRFA EAIKKEYPDQ LLSYNCSPSF NWKKNLDDAT IAKFQRELSA MGYKHQFITL
AGIHNMWHGM FNLAHDYARN DMTAYVKLQE QEFADASKGY TFVAHQQEVG TGYFDDMTTV
IQGGASSVTA LTGSTEEEQF H
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