| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3380 |
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| Symbol | |
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| ID | 6112332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3721660 |
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| End bp | 3723042 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641623162 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001750233 |
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| Protein GI | 170722545 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCGC TAGAAAACAA GAAACAGCGT TCCCTGCAGC ACGGCCTGAC CTCCCGTCAG
GTGTCGATGA TTTCCATTGC CGGCATCATT GGCGCCGGCC TGTTCATCGG TTCCTCCAAC
GCCATTGCCA CCGCTGGCCC GGCCATTCTC ATCTCCTACG CCATGACCGG CCTGCTGGTG
TTGCTGGTGA TGCGCATGCT CGGCGAAATG GCTATCGCCA ACCCCAACAG CGGCTCCTTC
TCCACTTACG CCTCCGAGGC AATCGGCCCC TGGGCAGGGT TCACCATCGG CTGGCTGTAC
TGGTGGTTCT GGGTGCTGAT CATCCCGGTC GAAGCCATCG CCGGGGCTGA CATCCTGCAT
GCCTACTTCC CGGCGGTACC GTCCTGGCTG TTCGCCTTCC TGATCATGTT TGTGCTGTCG
GGCACCAACC TGGTCAGCGT GAAGAACTTC GGTGCGTTCG AGTACTGGTT TGCCCTGGTC
AAGGTGATCG CGATCATTGC CTTCATCGTG GTCTGCAGCC TGGCTGTGTT CGGCTTCTGG
CCGCTGGCCG AAGTCTCAGG GGTGAGCCGG CTTTGGGACA GCGGCGGGTT CATGCCCAAT
GGCTTCGGTA CGGTGCTCGG TGGCGTGCTG ATCACCATCT TCTCGTTCTT TGGCGCCGAG
ATCGTCACCA TTGCCGCTGA CGAGACCGCC AACCCGAAAG ACAAGATTCG CCGTGCCACC
AACCTGGTGG TGTACCGCAT CGCGATCTTC TACCTGGCCT CGATCTTCCT GGTGGTGTCG
CTGGTGGCCT GGAACGATCC GCAACTCAAG GCCGTGGGCT CGTTCCAGCG GGTACTTGAG
GTGCTGAATG TGCCCGGGGC GAAACTGCTG GTCGACCTGG TGGTGCTGGT GGCGGTCACC
AGTTGCATGA ACTCCGGCCT CTATACCGCT TCGCGGATGC TGTATTCCCT CGGCGCCCGT
GGCCAGGCAC TGAGCATGAC AAAGCGTATC TCCGGTGCCG GCGTGCCGAC GGTGGCGGTT
ATCCTCTCGA CCCTGGCAGG CTTTGCCGGC TGCTTCGTCA ACTACGTATT CCCCGGCAAA
GTGTTCGGCT TCCTGTTGTC GACCACTGGC GCGATTGCCT TGCTGGTGTA CCTGGTGATT
GCCGTCTCGC AGTTGCGCAT GCGGGCCCGC GCCGATCGAG AGGGGCGGCC GCTGGAGCTG
AAGATGTGGC TGTTCCCCTG GCTGACCTGG CTGGTGATCG GCACCATCGT GATGGTGCTG
GGCTACATGC TGTTCAGTGA TGCCTACCGT TACGAGACGC TGATGACGGC CGGGGTGACC
CTGTTCATCC TGCTGGTTTC GCTGACCCAG CGGCGTGCCA GGGCGGTGGC GCAACCTGCC
TGA
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| Protein sequence | MASLENKKQR SLQHGLTSRQ VSMISIAGII GAGLFIGSSN AIATAGPAIL ISYAMTGLLV
LLVMRMLGEM AIANPNSGSF STYASEAIGP WAGFTIGWLY WWFWVLIIPV EAIAGADILH
AYFPAVPSWL FAFLIMFVLS GTNLVSVKNF GAFEYWFALV KVIAIIAFIV VCSLAVFGFW
PLAEVSGVSR LWDSGGFMPN GFGTVLGGVL ITIFSFFGAE IVTIAADETA NPKDKIRRAT
NLVVYRIAIF YLASIFLVVS LVAWNDPQLK AVGSFQRVLE VLNVPGAKLL VDLVVLVAVT
SCMNSGLYTA SRMLYSLGAR GQALSMTKRI SGAGVPTVAV ILSTLAGFAG CFVNYVFPGK
VFGFLLSTTG AIALLVYLVI AVSQLRMRAR ADREGRPLEL KMWLFPWLTW LVIGTIVMVL
GYMLFSDAYR YETLMTAGVT LFILLVSLTQ RRARAVAQPA
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