| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3362 |
|---|
| Symbol | |
|---|
| ID | 6112313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 3705086 |
|---|
| End bp | 3707083 |
|---|
| Gene Length | 1998 bp |
|---|
| Protein Length | 665 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641623143 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001750215 |
|---|
| Protein GI | 170722527 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.704835 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCA CGATTGACGC AGTCATCCTC TGGCCACGCT GCCCTGGCTT GGAGCCACGA
GTCATTCCCT TTCAAGACGG GAAGATCAAC ATCATTTACG GGCTGAGCGG CACCGGCAAG
TCGTCAATTG TGCACATCAT TGACTACGTG CTGGGCGCGA CCAAGTGCCA TATTCCGATC
GGCATCATCC GCGACACAGT GGATTGGTTC GGGATGAAAA TCCGCGTTCT CGGTACGACC
TACATCGTCG CGCGACGCAC TCCAGGAAAC TCCCAAGGCT CCAACGAGCT TTGCATGCTG
GAGGTGGACG ATGAACAGAT CCCGGACTCC GTTTACCGTA CCCATTCCCT GGCGCAGTAC
AAAGCCGCCT TTGATGGCAT GGTTCGGGTC AGTGACCTGC CCCACTCCGA TGAGGAAGAG
CCGTCCAGCT TTGATCGCCG CAGCTCCTAT CGCGACATGG CAGCGTTCAA TTTCCTGCCT
CAGCACATCG TGGCAAACCC CAACACCCTG TTCTTCAAAA CCGACTCGTT TGCTCACAAG
GAGCGCCTGA CGCGAGCCAT GCCCTACGCG CTCGGTATGG TGGATGCAAA CTACATCATG
AACGAACGGC GTCGGGATGA AGCGCAGCGC GAGCAAGATC GGCTGCGCAA GCAGCTAGCA
GTCCACGATG CGGCCAAGGC GAGCCAATAT GCTGACGTCG ACCAACTGTT TGATCGCTGC
ATTCAGCTGG GCTTGCTTGA GCGCACCAGC ACCCAGGGCG CTCAGAAAGT CGAACTGCTC
AAGAAGGTCG TCATCGCGAC CCATGAAGGA CGGCTTGAGC AGACACTTCT GGAACCTCAA
CGACTGCATA TCTCAGAAAA GCTGAAGGTG ATCATCGAGG AAGTCGGGAA GCAACAACGT
ATCGTTGACG AATTTGATGC CCAGATCGAT GGCTTCGACC ACCTGGCACG TAACAGCAAG
CGATTCGTCG CGGCCATTGA TACTGAGAAG TCCCATGTCA TTGGTCTCGA CTGGCTCAAA
CAGAGCGTCT CTGACGGTGG GCACTGCGTG GCCTGTGGCT CGTTCACCAA CGCCTTGCCT
ATGGTGATCG AGAATCTGGA AGAGAAGGTC AACAAGGTTA CCCGGATTTC GGACGCGCTC
AAGGACAATC CCGTCGTCGA CAAGCAACTG GCCACGCTGA AACGGCAGCG CGCCAAGGAG
GAGCGTGAGC TGTCGCGTTT GATGCGAGAG CAGAGTCGCT TGATCCAAGA GGATGAGCGT
ACCCGAAATG CCATTGGCCA GATCTACTAT GTGGCGGGTG AGATCAGCCG GCTAATCAAA
CAACTGGACG GCGCTGAAGC AGACGAGGGT CTGACCAAGC GCATGACCGA GCTGGAAAGC
CTGATTCGGC ATTACAACTT CCAGATGTCG TTGACTGACA TGGCTGAGCA AGAGCGGAAG
GTCGATGCCC AGCTGGCCCC GATGTTCGAG GACTATGCGG ATCAGTTCGG CTTGAACGGA
ACGCCTGGCG CTCAGATTTA TCTCGATCGG AAAGAGCTCA CGCTTCGCTT CGACTCCCAC
GGCCAGCGGG ATTTTCTCTG GGAAATCGGC AGTGGTGCGA ACTGGATGGG CTATCACATC
GCGACGTTCC TAGGCATTCA TGAATACCTG TCGAAGGAGG AGAATCGCAA GCTCCCACCT
TTCAGCTTCA TCGTGATCGA CCAACCGAGC CAGGTCTATT TCCCAAGCAA TACCGGTGGC
ATCAACGCAC TGGATGCGGG TTTCGAAGCG GTGAATCAAG CCCGGCCAGC GGATGTCGTT
GCCACGCGCC GAATCTTCGA AGTCTTGGCT GAAGGCCTCA AGCGTGCCGG CCATTTCATC
CAGATCATTG TCCTTGAACA TGCGGGCCCA GACATCTGGG GACAGGTCGC TGACACCGTG
CCCGTAGCGG CGTGGCAGAG CAAAGACGAC GGGCTCATCC CTGCCCACTG GATCCACCGT
CACAATGACT TAGCGTAA
|
|---|
| Protein sequence | MKFTIDAVIL WPRCPGLEPR VIPFQDGKIN IIYGLSGTGK SSIVHIIDYV LGATKCHIPI
GIIRDTVDWF GMKIRVLGTT YIVARRTPGN SQGSNELCML EVDDEQIPDS VYRTHSLAQY
KAAFDGMVRV SDLPHSDEEE PSSFDRRSSY RDMAAFNFLP QHIVANPNTL FFKTDSFAHK
ERLTRAMPYA LGMVDANYIM NERRRDEAQR EQDRLRKQLA VHDAAKASQY ADVDQLFDRC
IQLGLLERTS TQGAQKVELL KKVVIATHEG RLEQTLLEPQ RLHISEKLKV IIEEVGKQQR
IVDEFDAQID GFDHLARNSK RFVAAIDTEK SHVIGLDWLK QSVSDGGHCV ACGSFTNALP
MVIENLEEKV NKVTRISDAL KDNPVVDKQL ATLKRQRAKE ERELSRLMRE QSRLIQEDER
TRNAIGQIYY VAGEISRLIK QLDGAEADEG LTKRMTELES LIRHYNFQMS LTDMAEQERK
VDAQLAPMFE DYADQFGLNG TPGAQIYLDR KELTLRFDSH GQRDFLWEIG SGANWMGYHI
ATFLGIHEYL SKEENRKLPP FSFIVIDQPS QVYFPSNTGG INALDAGFEA VNQARPADVV
ATRRIFEVLA EGLKRAGHFI QIIVLEHAGP DIWGQVADTV PVAAWQSKDD GLIPAHWIHR
HNDLA
|
|---|
| |