| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3342 |
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| Symbol | |
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| ID | 6112293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3684142 |
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| End bp | 3684924 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641623124 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001750196 |
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| Protein GI | 170722508 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGA ATTCAGACAT TTCTGCCGTT GTCACAGGAG GTGCTTCTGG TTTGGGGGCT
GCCACAGCAA GGCGTTTGGC CAGGTATGGC GTGAAAGTCG CCATTTTCGA TATGAACGAG
ACAGTAGGCT TGGCGCTGGC AAACGAAATC GGTGGCATTT ACTGCAATGT AGATGTGACT
TCTGACGAGC AAGTGGACAA GGCATTTACC AAAGCCCGTG CTGCTATCGG ACAGGAACGC
ATTTTGGTTA ACTGTGCGGG TACTGCCGAT GCTGTTAAAA CCGTTAGCCG AGACAAGAAG
ACTGGTGAAA TTCGTCCATG CACTACAGAT CGATTTAATC GCATCATTCA AATTAACCTG
CTAGGCACTT TCCGTTGTAT CACCAAATCG GTCGCCGGCA TGATGACGCT TGCGCCGCTG
GACGATGGCG ACCGCGGTGT CATCATCAAC ACCGCTTCGG CGGCTGCACA GGACGGTCAA
GTCGGCCAGG CCAGTTATGC TGCAAGCAAG GCGGCTGTTG TAGGCATGAC TTTGCCGATC
GCGCGTGACC TGATGGACGA AGGTATCCGA GTCAATACCG TTATGCCTGG GCTGTTTGGT
ACGCCACTGA TGCAAAGTCT TCCTGACAAC GTGCAACAGG CGCTCGCGGC ATCTGTGCCA
TTTCCTAAGC GCTTGGGTGA GCCTGACGAA TTCGCGAGGA CCGTCGAGTT TCTCGTCAAT
TGTGGCTACA TGAACGCCGA GTCTCTCCGC GTGGACGGCG CCATTCGCAT GGCACCACGT
TAA
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| Protein sequence | MELNSDISAV VTGGASGLGA ATARRLARYG VKVAIFDMNE TVGLALANEI GGIYCNVDVT
SDEQVDKAFT KARAAIGQER ILVNCAGTAD AVKTVSRDKK TGEIRPCTTD RFNRIIQINL
LGTFRCITKS VAGMMTLAPL DDGDRGVIIN TASAAAQDGQ VGQASYAASK AAVVGMTLPI
ARDLMDEGIR VNTVMPGLFG TPLMQSLPDN VQQALAASVP FPKRLGEPDE FARTVEFLVN
CGYMNAESLR VDGAIRMAPR
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