| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3330 |
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| Symbol | |
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| ID | 6112281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3668555 |
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| End bp | 3671296 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641623112 |
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| Product | hypothetical protein |
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| Protein accession | YP_001750184 |
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| Protein GI | 170722496 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.543175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATG ACGCGAGTCG CGATCCGTCC CGCTGGGAGC CCTGGCGCGC GGCACAGCGC
CGTCGCGCCA CCCTGGCCGA CGAAGCCGCC CAGTACGCGC ACAACCCCAG CTTCGCCGAC
CACCTGCCCT GGGTCGAGTA TCTGGAAGAG GAGCAGTCCA TTCTGCTCGA CGACAACCGT
TCCGTGGGCG CAGTGTTCGA GCTGCAGCCG ATCGGTACCG AGGGTCGTGA GCCCGAATGG
TTGATGGCTG CGCGCGACGC CCTGGAAGAT GCGCTGCAGG ACAGCTTCGA CGAGTTCGAC
CAGGCGCCCT GGGTGGTGCA GTTCTTCTGC CAGGACGACA GTGACTTTGC CCCGTACCTT
GAACGCCTGG AACGCTATAT CGCGCCGCGC GCGCGAGGTA CGCCGTTCAC CGAGGCCTTC
CTCACGTCGA TGCAACGCCA CCTCGACGCC GTCGGCAAGC CGGGCGGGTT GTTCGACGAC
CATGTCGTGT CTCACCTCCC CTGGCGCGGC AGCAATCGGC GGATTCGCCT GGTGGTCTAC
CGCTGGCTCG GGGAGCAGGC CGACGAGGAT GGGCAGAACC CGGTCCAGCT GTTGAGCCGC
ACCTGCGATC GTCTGGTGGC CTCGCTGCAG GCCTGCGGAG TCAGCCCTCA CCGGCTGACC
GGGCACGATT TCTACGCCTG GTTGCTGCCC TGGTTCAACC CGGCCCCTGC CCTCACCGAC
GAAACGCCTG CCGCGTTCTA TCGACGTGTG CCCTACCCGG AGACGGAGGG CAGCGAGGAG
CTGCCGTTGC CGTTCGACCA CGACTTCGCC GAGCGGCTGT TCTTCCAGGA ACCGCGCTCC
GATAGCGAGC AGGGTCTGTG GTACTTCGAT CAGCAGCCCC ACACCGTGAT GGTGGTCGAC
AAGCTGCGCA GACCGCCGCA TATCGGCCAA CTGACCGGTG AGACGCGCAA AGGTGAGGCG
TTGAACGCCT TGTTCGATCA ATTGCCCGAG CAGGCGGTGA TGAGCCTGAC TCTGGTGATC
ACGCCCCAGG ATGTGCTCGA GGAGCAACTC AATCGCCTGG CGCGCAAAGC CATCGGCGAG
AACCTCGCCT CGACCCAGAC CCGCCAGGAC GTGGAAGAAG CCCGTGCGCT GATTGGTCGC
CAGCACAAGC TGTACCGTGG CACGTTGGCG CTGTACCTGC GCGGCGCCGA TGAGCAGCAG
CTGCGCCAGC GTTCGGTCCA AGCTGCCAAC GTATTGCTCG GCGCCGGCCT ACAACCGGTG
CGCGAGGGCG ATGAAGTGGC CGCCTGCAAC AGCTACCTGC GCTGGTTGCC GATGGTCTAC
AACCCGGTGC GGGACCCACG CAATTGGTAC ACCCGGCTGC TGTTTGCTCA GCACGTCGCC
AACCTGCTGC CGCTCTGGGG GCGCAGCATC GGTACCGGCA ACCCGGGTAT CACCTTCTTC
AACCGCGGTG GCGCGCCGCT GTCATTCGAC CCGCTGTCGC GCTTTGACCG CTCGATGAAT
GGACACCTGC TGTTATTCGG CCCGACCGGC GCCGGCAAGT CGGCCACCCT GGTCTCGATC
CTGATGCAGG TCATGGCCGT GTACCGGCCG CGGCTGTTCA TCGTCGAGGC GGGCAACTCC
TTTGGACTAC AGGGTGACTA TTTCGCCACC CTCGGCCTAA CCGTCAACAA GGTTCAGCTC
AAACCGGGCA GTGACGTAAG CCTGGCGCCG TTCGCCCATG CCCGGCGACT GATCGACCAT
CCGGACCAGG TCGCCAGTCT GTCGACTGAA GACCTGGATG AGGCCGCCCC GGACAGTGAC
GAGCAGCGCG ATGTGTTGGG CGAGCTGGAG ATCACCGCAC GGCTGATGAT CACCGGCGGC
GAAGCCAAAG AAGAGGCGCG CCTGACCCGG GCGGACCGCA GCCTGATCCG CGAGTGTATC
CTGGATACCG CCCGTTACTG CGCGACGACT GAGCAGCAGG TGCTGACCCG GCATGTTCGC
GATGCCCTGC GTAAGGTCGC CAGCGACACC CACCTGCCCG ACAAACGCCG TGAGCGTGCG
CAGGAGATGG CCGAGTCCAT CGACCTGTTC TGCCAGGGTT TCGAAGGTGC ACTGTTCGAC
CGGCCCGGCA CACCCTGGCC GGAGAGCGAC GTGACGATCG TCGACCTCGC CACGTACGCC
CGTGAGGGAT ACGAGGCGCA GATGTCGATC AGCTACATCA GCCTGATGAA CACAGTGAAC
AACATCGCCG AGCGCGATCA GTACCTCGGC CGTCCGATCA TCATGGTCAC CGACGAAGGC
CACATCATCA CTAAGAACCC GCTGTTGGCG CCCTTCGTGG TCAAAGGCAC GAAGATGTGG
CGCAAGCTCG GCGCCTGGTT CTGGCTGGCA ACGCAAAACA TGGCCGACTT GCCCGATGCG
GCGCAGACCA TGCTCAACAT GATCGAATGG TGGATCTGCT TGAATATGCC GCCAGCGGAA
ATCGAGGAAA TAGCCCGCTT CAAGAAACTC ACGCCGGCGC AGAAAGCGCT GCTGCTCTCC
GCAAGCAAGG CCTCGGGCAA GTACACCGAG GGCGTGGTCC TGTCGAAGAA CCTGGAGACG
CTATTCCGGG CGGTGCCACC GAGCCTGTAC CTCGCGTTGG CCATGACCGA GCCCGAGGAA
AAAGCTCAGC GCTGGCGGTT GATGGAAGAG CACCAGCAGT CCGAGCTGGA AGCCGCCCTG
CAGGTCGCGG CGGAGATTGA TCGCCTGCGC GGCATCTCGT GA
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| Protein sequence | MADDASRDPS RWEPWRAAQR RRATLADEAA QYAHNPSFAD HLPWVEYLEE EQSILLDDNR
SVGAVFELQP IGTEGREPEW LMAARDALED ALQDSFDEFD QAPWVVQFFC QDDSDFAPYL
ERLERYIAPR ARGTPFTEAF LTSMQRHLDA VGKPGGLFDD HVVSHLPWRG SNRRIRLVVY
RWLGEQADED GQNPVQLLSR TCDRLVASLQ ACGVSPHRLT GHDFYAWLLP WFNPAPALTD
ETPAAFYRRV PYPETEGSEE LPLPFDHDFA ERLFFQEPRS DSEQGLWYFD QQPHTVMVVD
KLRRPPHIGQ LTGETRKGEA LNALFDQLPE QAVMSLTLVI TPQDVLEEQL NRLARKAIGE
NLASTQTRQD VEEARALIGR QHKLYRGTLA LYLRGADEQQ LRQRSVQAAN VLLGAGLQPV
REGDEVAACN SYLRWLPMVY NPVRDPRNWY TRLLFAQHVA NLLPLWGRSI GTGNPGITFF
NRGGAPLSFD PLSRFDRSMN GHLLLFGPTG AGKSATLVSI LMQVMAVYRP RLFIVEAGNS
FGLQGDYFAT LGLTVNKVQL KPGSDVSLAP FAHARRLIDH PDQVASLSTE DLDEAAPDSD
EQRDVLGELE ITARLMITGG EAKEEARLTR ADRSLIRECI LDTARYCATT EQQVLTRHVR
DALRKVASDT HLPDKRRERA QEMAESIDLF CQGFEGALFD RPGTPWPESD VTIVDLATYA
REGYEAQMSI SYISLMNTVN NIAERDQYLG RPIIMVTDEG HIITKNPLLA PFVVKGTKMW
RKLGAWFWLA TQNMADLPDA AQTMLNMIEW WICLNMPPAE IEEIARFKKL TPAQKALLLS
ASKASGKYTE GVVLSKNLET LFRAVPPSLY LALAMTEPEE KAQRWRLMEE HQQSELEAAL
QVAAEIDRLR GIS
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