Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3321 |
Symbol | |
ID | 6112272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3662167 |
End bp | 3663486 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641623103 |
Product | major facilitator transporter |
Protein accession | YP_001750175 |
Protein GI | 170722487 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACAG TCGCTACTGG ATACTCGGAA TCCGTTACAC CCGGTTCGAT CCCCTTCGAT GACGCGCCGC TACGGCGCGT ACACGTCAAG GCGATTGCCG GCGGCATGGG CGGCCAGTTC ACCGATGGTT TCATCATCGG CATGATCGGC ATCGCCCTAA GCATGGCCGC CGGTGACCTG CACCTGAACA ATTTCTGGAC AGGCCTGATT GCCGCTGGCT CCCTGCTCGG TATTCTGTTT GGCAGCTTGC TGGCCGGCTC GGTGGTCGAC CGTATCGGCC GCAAGGGCAT CTACAACCTG ACGATCTGGG TGTTCGCCGT TGCTGCGGTG CTGCAATTCT TCGTCACTTC TCCTGAGCAG TTGCTGGCGT TGCGCCTGGC GCTAGGGCTG GCGATTGGCG CCGACTACGC GGTCAGCCTT TCGCTGGTCA GCGAGCTGGC ACCCAAGCGC CATCGCGGCC GCATCATGAG CGCCGTGATG ATCGCCTGGG TGGCGGGCTT CGTGTTCGCC TACTTTGCCG GTGTGCTGAT CGAGAATATG GGGGAAGGCG CGTGGCGCTG GGCCCTGGCC AGCAGCTTCA TTCCGGCGGT GATCACCCTG CTTATCCGCA TGGGCACGCC TGAGTCGCCG CTGTGGCTGA TCTCCAAGGG CCGTCGGCCG GAAGCGCAGG CCATCGTCGA ACAGCACATG GGCGCCGATA TTGCCTTGCC GGTGGAAAGC TCCGTACAAA AGAACGCCGG CTGGGCACAG TTGTTCAGCC GCACCTGGCG CAAGAATGCC TTTGTGGGCG CGGCGTTCTA CTTCTGCCAG GTGATACCTT TCTTTGCGTT GGGCACGTTC ATTCCGCGGG TGCTGGAAGC GATCAACGTG GAGAACACCG AGGCGGGCTC GATCATCTAC AACATCTTCC TGTTCGTCGG CATCCTGGCC GGGTTCTGGA TCGTCGACAA GATCAGCCGT CGTGCCTTCC TGATCGGCAG CTTCTACTTC TGTGCCGCCG TGCTGCTGGT GCTGACCCTG TGGGCGGGCA TGCCGCCAAT GCTGGCGGTG GTGTTGTTCT CGGCGTTCGC GGTGGTGATG TCGGGGTGTA CGGTGCTTGA GTATGCCTAC CTGCCAGAGC TGTTCCCGAC TGAATTGCGT GCTTCGGGGA TCGGCTTTTC GGTGGCCATG AGCCGGCTGG GTGCAGCGGG CGGGACCTTC CTGCTCCCGA TCGTAATGGA GACCCACGGG GTACAGGCGA CGCTGGGCAT CTGCATCGGT GCGCTAGTGC TGGGGGGGGT GATTTGCCAG GCGTTTGCGC CGGAGCCTGC GCGAGCTTAA
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Protein sequence | MSTVATGYSE SVTPGSIPFD DAPLRRVHVK AIAGGMGGQF TDGFIIGMIG IALSMAAGDL HLNNFWTGLI AAGSLLGILF GSLLAGSVVD RIGRKGIYNL TIWVFAVAAV LQFFVTSPEQ LLALRLALGL AIGADYAVSL SLVSELAPKR HRGRIMSAVM IAWVAGFVFA YFAGVLIENM GEGAWRWALA SSFIPAVITL LIRMGTPESP LWLISKGRRP EAQAIVEQHM GADIALPVES SVQKNAGWAQ LFSRTWRKNA FVGAAFYFCQ VIPFFALGTF IPRVLEAINV ENTEAGSIIY NIFLFVGILA GFWIVDKISR RAFLIGSFYF CAAVLLVLTL WAGMPPMLAV VLFSAFAVVM SGCTVLEYAY LPELFPTELR ASGIGFSVAM SRLGAAGGTF LLPIVMETHG VQATLGICIG ALVLGGVICQ AFAPEPARA
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