Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3319 |
Symbol | |
ID | 6112270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3659346 |
End bp | 3661019 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641623101 |
Product | L-serine ammonia-lyase |
Protein accession | YP_001750173 |
Protein GI | 170722485 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCTA TGTACTCATT CTGCCGCAAC CTTCCCCCCT ATGATTTTTC AACGGGCAAG CCTGAGCCCG GCCATAACTC CAAGACCGCA CCCGTGGAAG CGTTCATGAC CCAAGACATC AGCCTGCTCA ATACCGTCAT CGGCCCCGTG ATGCGTGGCC CCTCCAGCTC TCATTCTGCC GCACCCTACA TGATCGGCCG AACCGTGCGG GAACTGGCGC TCGGCCCTGG GGAGCGGTTG AAATCGGTGG TCATCCGTTT CGACCCTTCT GGCTCGTTCG CCGAGGTATA CAGCAACCAG GGCAGCGATG AAGGCTTTGC GGCCGGGCTG GCGGGCGTGG CGATCACCTC CGAAGCGTAC AGGCAGGCCT TGCAACGCGC TTGCCGAGGG GAAGACTTCG AGTTCGCTAT CCGCATCGGG CCGCTGGATC GTAACGACCA TCCGAACCGG GTCGATCTGC ATGTATGCGT CACTGGCATC CATGCCCAGG AACGCACCGA TGTGTTCGAG GGCGTGTCGC TCGGCGGCGG CACATTTCTG GTTACCCACC TCAATGGCCA GCACATCAAT GTGGACGGCG CCGCGTACAC GTTGATTGCC GAACACGAAG TTGCGGCAAC AGGCGACCTG TTGCCCTACC TTGAAGGCGC GCAGGTTGCG GAGCAACACG CGCTCAATGG CATGACGCTC TACGCCCTCA CCGTCGCGCC ATCGGTCCGG ATGCTCGCCG ACCTGCGCGG GCTGGCTGGC CTGCGCAGGG TGCGCCTGGC CAGCCCCACC CAGGAAGTGG TGCACAACCG CGAACGTACC CTGCTGGGCG CCAGCGAACT GCTGCAACGT GTAGCTGCGG ACGCCGACTT GGCCGATTTT GCGATGGCTT ACGAATGCGC CCGGCTCGGG CTGGACCTGG CAGCCGTCCA GCAGCGCTTC GATGAACGCG TGCAGTTGAT GGCCGCCTCG GTGGAGGCCG GTCTGGCTAA GGAAGACAGC GCCGGCATGA AGTACCTGCG CCCTACGGCC CGTCGGTTTT CCCATACCCC GCTGCCGGAG CCACTGGAAA CCAGCTTCCT CAAGACAGCT ATCGCCGGCG CATTGGCCGC CATGGAAGAA ACCACCAGCC GCGGCGTGGT GTGCGCGGCG CCCACGGCAG GCAGCGCCGG CATCGTGCCC GGTTGCCTGC ACGCACTGCG TGTACTCGGC GCCAGCGAGC ATGCCTTGAG CGACAGCCTG AAAGTGATGG CGCTGATTGG CGCACTGTTC GCGGTGCGTG GCTCATACGC CGCAGAAACG GGCGGCTGCT CGGTGGAAAC CGGCACCTCG GCAGCCATGG CGGCGGCCGG CATCACTCAC TACTTCGGCG GTACGCCGGC GCAGATCCTC GCCGCCGCGT CCATCTGCCT GATGAACACC TTGGGCCTGA TCTGCGACCC GGTGGGTGGC GAAGTGGAGA TCCCCTGTCA CGCCCGCAAC ATCGCCGGCG TAGGCCATGC GTGGAGCGCC AGTACTGCGG CACTGGGCGG TTTCGATGCA GTCATTCCCT TCGATGAACT GGTCGAGCAG ACCGTGAAGG TAGGCAACAT GATGCACCCC GATTTGCGCT GCACGGCGCG CGGCGGTTGC GCGACCACGC CCTCAGCGCT GCGCCTGGTC GCTGTCAAGA ACCTGGGAGC CTGA
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Protein sequence | MSAMYSFCRN LPPYDFSTGK PEPGHNSKTA PVEAFMTQDI SLLNTVIGPV MRGPSSSHSA APYMIGRTVR ELALGPGERL KSVVIRFDPS GSFAEVYSNQ GSDEGFAAGL AGVAITSEAY RQALQRACRG EDFEFAIRIG PLDRNDHPNR VDLHVCVTGI HAQERTDVFE GVSLGGGTFL VTHLNGQHIN VDGAAYTLIA EHEVAATGDL LPYLEGAQVA EQHALNGMTL YALTVAPSVR MLADLRGLAG LRRVRLASPT QEVVHNRERT LLGASELLQR VAADADLADF AMAYECARLG LDLAAVQQRF DERVQLMAAS VEAGLAKEDS AGMKYLRPTA RRFSHTPLPE PLETSFLKTA IAGALAAMEE TTSRGVVCAA PTAGSAGIVP GCLHALRVLG ASEHALSDSL KVMALIGALF AVRGSYAAET GGCSVETGTS AAMAAAGITH YFGGTPAQIL AAASICLMNT LGLICDPVGG EVEIPCHARN IAGVGHAWSA STAALGGFDA VIPFDELVEQ TVKVGNMMHP DLRCTARGGC ATTPSALRLV AVKNLGA
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