Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3303 |
Symbol | |
ID | 6112254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3642386 |
End bp | 3642940 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641623085 |
Product | lytic transglycosylase catalytic |
Protein accession | YP_001750157 |
Protein GI | 170722469 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCGT ATCGACTGAT CCTGGCGCTG GCCTTGACCG GCACTACGGC CGTTCATGCG GGCTCGCTGC CGCCGCCGGC GTATCAACTG GCCGCCGAGC GCGCTGGCAT CCCAGCGTCA GTGCTGTTCG CCATCGCCCT GCAGGAGAGC GGTACGCCGC TGCGGGGTCA CCTCATGCCC TGGCCTTGGA CCTTGAATGT CGCCGGCACA CCGCTGCGCT TCGCCCGCCG TGATGAGGCG TGTGCTGCAC TCAAGCAGGC GCTGATCCGC CACGACCCCA AGCGCATCGA TGTCGGGCTG GGGCAGACCA ACCTCGGCTA CCACCTGGAC CGCTATCACA GTGCCTGCGA GGCCCTCGAT CCACGCGCCA ACCTGGCTGT GACTGCCGAG CTGCTGCGCG CCCACTATGC CGACAGCGGT GACTGGGTCG TGGCGGCAGG CCGCTATCAC CGTCCTGCCG GCGGTAAACC CGCAGCGCAG TACCGCCGAC AGTTCAGCCA GCACTGGCAG CGGGTTCAGG CAGTTGTGGG ATCTCCGAGA GGGCCACGGC CATGA
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Protein sequence | MAAYRLILAL ALTGTTAVHA GSLPPPAYQL AAERAGIPAS VLFAIALQES GTPLRGHLMP WPWTLNVAGT PLRFARRDEA CAALKQALIR HDPKRIDVGL GQTNLGYHLD RYHSACEALD PRANLAVTAE LLRAHYADSG DWVVAAGRYH RPAGGKPAAQ YRRQFSQHWQ RVQAVVGSPR GPRP
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