| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3295 |
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| Symbol | |
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| ID | 6112246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3635452 |
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| End bp | 3637419 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641623077 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_001750149 |
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| Protein GI | 170722461 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.17428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGT TCATCTGCGA GAAACCTTCC CAAGCCCGCG ACATCGCCCG GGTGCTGCAG
GCCAGCCGCC GCGGTGATGG TTGCCTGACG GGTCAGAACC TCACCGTCAC CTGGTGCGTC
GGTCATCTGC TGGAGACCGC GCCTCCTGAA ACCTATGGCG ATTACAAACG CTGGTCGCTG
GACGACCTGC CGATCATTCC CAGCCGCTGG CAACTGGTGG CCAAACCCAA GGTCGCTGGC
CAGCTGAAGG TGATCAGCCA GCTGCTGCGC ACTTGCAGCG AAGTGGTGAT CGCCACCGAC
GCCGACCGCG AAGGCGAGAT GATCGCCCGG GAGATTCTCG AACGATGCCA GTATCAGGGG
CCGATTCTGC GCCTGTGGCT GTCCGCGTTG GATGAAACAT CGATCCGTCG AGCCTTGAGC
GCATTGCGCC CGGGGGAGCA GACCTTGCCG CTGTACCACT GTGCACTCGC CCGCTCCCGT
GCCGATTGGC TGGTCGGCAT CAACTTGAGC CGGCTGTTCA CGCTGCTCGG CCGCCGCGCT
GGCTTCGATG GCCTGCTGCC GGTGGGACGT GTGCAAACCC CCACCTTGCG CCTGGTGGTC
GAGCGCGACC GGGCGATCGC CAGCTTTGTG CCGCTACCAT TCTGGACCGT CGATGCGCAC
CTGGAACAGG ACGGGATCCG TTTTCACGCG CGCTGGCAGG CCCCGAACGC GGTCAGCGAT
GCGGTTGGAC GCTGTATCGA CGAAACCGCC GCGCAGCAGG CGCTCAGGCG CCTCACTCAA
GCTGGCAGCG CACAGATCGA CAGCGTCGAG GTCGAGCGGG TGCGGGAAGG TCCGCCACTG
CCGTTCGACC TGGGCACGCT GCAGGAGATC TGCTCGGCCA AGCTCGGACT CGGAGCACAG
GAGACCCTGG CCACTGCCCA GGCCCTGTAC GAGACCCACA AGGTGACGAC CTACCCGAGA
AGCGACTGCG GCTACTTGCC GGAGAGCATG CTCGATGAGG TGCCGCGCGT CCTTCACGCC
TTGGCCGCCG CCGCACCATC GCTGGGGGAA ATCCTCAAGG AGGTCGACCC CAGCCGCCGC
TCCCGTGCCT GGAACAGCAG CAAGATCACC GCGCACCACG GCATCATTCC CACCGCCGTC
ACGCTGGATT TGGCGCAGCT CTCCGAGCGC GAGCGTGCGG TTTACACGCT GATTCGCGCA
CGCTACCTCG CGCAGTTCAT GCCCGAGCAC GAGTACCTGA AAACCCAGGC GCAGTTGCAC
AGCCAGGCAG ATCACCTGGT GGCGCGCGGC AAACAGATCC TGGCCCGCGG CTGGAAGGCA
GTGATCAACG AGGCCGACGG TAACGAGCCG GCCGAACAGG CGCAGCGATT ACCCACGTTG
CGTGAATCCG CGACGGTGGC GCTGATCGAC GCCACCCTCA ACGCACAGCG CACACAACCG
CCCAAGGCCT ACACCGAAGG CACCCTGGTC AGAGCGATGA AAACCATCGC CAACCAGGTG
GCTGATTCGC GGCTCAAGCA GAAGCTCAAG GACAGCTGCG GGCTCGGTAC CGAGGCCACC
CGCGCGGCCA TCATCCAGGG CCTGATCGAT CACGGTTACC TGACCAAGAA GAAACGCAGC
CTGGCTGCCT CCGCGGCGGC GCATACCTTG ATCGAAGCGG TGCCACCAGA GGTGGCCGAC
CCGGTCATGA CCGCACTGTG GGAGCAGGCG CTGGACCGTA TCGAGTCGGG CCAACTGAGC
GTCGAGACCT TTCTCGCCAA GCAGACAGAA TGGCTGACTC GACTGGTGCG CAGTAACGCG
ACGCTCACCC TGCGCCCGCC CCCCAGCAAG GGGCCCTTCT GCCCGGTCTG CCGCAGCGCC
ATGCGCCAAC GCAAAGGTCG CACCGGCAGC TTCTGGTCGT GTATCCGCTA CCCCGAATGC
AAGGGCACCA AACCGGTGGC AAAAACCAAG CGGGCGAAAA ACACATGA
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| Protein sequence | MRLFICEKPS QARDIARVLQ ASRRGDGCLT GQNLTVTWCV GHLLETAPPE TYGDYKRWSL
DDLPIIPSRW QLVAKPKVAG QLKVISQLLR TCSEVVIATD ADREGEMIAR EILERCQYQG
PILRLWLSAL DETSIRRALS ALRPGEQTLP LYHCALARSR ADWLVGINLS RLFTLLGRRA
GFDGLLPVGR VQTPTLRLVV ERDRAIASFV PLPFWTVDAH LEQDGIRFHA RWQAPNAVSD
AVGRCIDETA AQQALRRLTQ AGSAQIDSVE VERVREGPPL PFDLGTLQEI CSAKLGLGAQ
ETLATAQALY ETHKVTTYPR SDCGYLPESM LDEVPRVLHA LAAAAPSLGE ILKEVDPSRR
SRAWNSSKIT AHHGIIPTAV TLDLAQLSER ERAVYTLIRA RYLAQFMPEH EYLKTQAQLH
SQADHLVARG KQILARGWKA VINEADGNEP AEQAQRLPTL RESATVALID ATLNAQRTQP
PKAYTEGTLV RAMKTIANQV ADSRLKQKLK DSCGLGTEAT RAAIIQGLID HGYLTKKKRS
LAASAAAHTL IEAVPPEVAD PVMTALWEQA LDRIESGQLS VETFLAKQTE WLTRLVRSNA
TLTLRPPPSK GPFCPVCRSA MRQRKGRTGS FWSCIRYPEC KGTKPVAKTK RAKNT
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