| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3271 |
|---|
| Symbol | |
|---|
| ID | 6112222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 3611135 |
|---|
| End bp | 3612223 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641623053 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001750125 |
|---|
| Protein GI | 170722437 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.800565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAC CGTTAGTGGT ATTCGATAAC GTAGCCAAAA ACTTTGGCAG TTACGTCGCT
GTCGAACCGA TGAACCTGGA AATCCACAAG GGCGAGTTCG TTGCGATCAT GGGTTCCAGT
GGCTGTGGTA AAACCACCAC GCTGCGCATG CTTGCCGGGC TCGACAAGCC CAGCAGCGGC
GAAATTCGCT TGAACGGCGA GCGCATCAAC GACCTGTATT CCTGGCAAAG GGACACCCCA
CTGGTGTGGC AGAACCTGGC GCTGTTCCCC TTTCTGACCG TGCTTGAAAA CGTTGAGTTC
GGTTTGCGCA TGCGCGGCAT GGGCAAAGCC GAACGGCGCA AAAAAGCCCT GCAATGGCTA
GAGCGCCTGG ACTTGGGCGA GTTTGCCAAG CGTGATATCA GCATGCTTTC TGGCGGGCAA
CGGCAGCGGG TGGCGCTGGC GCGTTCACTG GTTACCGAGC CCCCGATACT GCTGCTGGAC
GAACCGCTCA GTGCCCTCGA TGCGCACCTG AGCGTGCGCA TGCAGGCGGT GTTGACTGGG
TTGCAGAAGG ACCTTGGCAT CACCTTCGTC TATGTCACTC ACAGCCAATC AGAAGCCTTC
GCCATGGCTG ACCGCGTGGT GATCATGAGC CGTGGCCGGG TCGAGCAGAT TGGCACGCCC
AAGGCTATTT TCTTCGAACC GCACAACCGT TTTGTCGCTG AGTTCGTCGG CGGCAAGAAC
ATGTTTGACG GCGTCGTGCT TGGCCTCGAC GACACCGGGC TGGTGCAACT GAACTCGGCG
CATGGCCGCT TTCTGGCGCG CTTGCCCGAA GACCGACCTG TCGAGGTAGG TGAAGAGGTC
ACCCTGTGCA TCAGTGCCGA GCATATCAAC CTGGCCGTAC AACCGACCAG CACCAGCCGC
CTGGAGTGTA CCGTGGTGGG AGAGGAGTTC ATCGGTTCGA TGGTCAACGT CTACCTGGAA
ACCGCCAACG GGCTGGAACT GCAAGTGCAG AGGCTGCACG CGGATTACGA CTTGCTTGGG
CTCAAGGGTG GGCAGACGGT GCATGCCGGG TGGGACGACG CGCGGGCGCT GATTTTACGT
GGCAATTAG
|
|---|
| Protein sequence | MTQPLVVFDN VAKNFGSYVA VEPMNLEIHK GEFVAIMGSS GCGKTTTLRM LAGLDKPSSG
EIRLNGERIN DLYSWQRDTP LVWQNLALFP FLTVLENVEF GLRMRGMGKA ERRKKALQWL
ERLDLGEFAK RDISMLSGGQ RQRVALARSL VTEPPILLLD EPLSALDAHL SVRMQAVLTG
LQKDLGITFV YVTHSQSEAF AMADRVVIMS RGRVEQIGTP KAIFFEPHNR FVAEFVGGKN
MFDGVVLGLD DTGLVQLNSA HGRFLARLPE DRPVEVGEEV TLCISAEHIN LAVQPTSTSR
LECTVVGEEF IGSMVNVYLE TANGLELQVQ RLHADYDLLG LKGGQTVHAG WDDARALILR
GN
|
|---|
| |