| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3259 |
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| Symbol | |
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| ID | 6112211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3600177 |
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| End bp | 3601532 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641623044 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001750116 |
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| Protein GI | 170722428 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAATCG ACCGGCCTTT ATGGGCGTCC GGAGTGGTGT TGTCTGCGCA GCAGTTTCAA
CAGCAGGCCC GCTTTGAATC GTGGACCAAC CAGAGTATTG CCTCACTGGG CTTGGTCCAC
CCTTGGGGCA TCCGAAGTGT GGCGTTTGAT GCAGATGCGC TGAGGTTGGG TAAGCTGATG
GCCACTCGGC TTCAGTTGTG CCTACCAGAC GGTACTTTGA TCGACACCGA TCGGCTGGAT
CGACTACCCA GAGCCCTGGA ACTCTCTCGG GTATTGCCCG GAGATATCCA GACGGCAACG
GTTGTGATCG CTTTGCCACT GGAACAGGCC AATGGTAACA ACTGCCTGTT TGAGGGTGGC
AGCGCTGAGC GGCCCGTCAG ATATCACCAG GTATGGCGTG ATACCAAGGA TCTCTACACC
AGTGAAATAC AGTCAATCAG CGTGCTCGAA CATGCGCTGA GCTTGCGTCT GGCTGATGAC
GATAATGCGG ATTATCTGAC CTGCCCGGTG GGTCGTTTGC TGCGTGATGG CAAGGATGGG
TGGGCCATTG ATGATACCTA CATCCCGCCG TTGCTGAAGT TTGATGCTCA TGCTGGGTTG
TTGCTTCAAC TCGACAACCT GCTCACCCAG CTGTCCGCCA AGCGTGAGCG TTTGATGGGA
ATGCGCCGGG AGAGCAACCA GCGAATGGCG GATTTCGCTG TTGCAGATGT CACGTTGTTC
TGGTTGCTCA ACGCACTGAA CACCTATCAG CCGGTGTTGG CAGACCTAAA AGCGCAGCCT
GCTCGCCATC CGGAGCAGGT ATATCAACAG TTGGTGAAGC TTGCAGGTGG CCTGCTGACC
TTCTCGTTAG ACCAGCACAT AGAGGACATA CCCGCCTACC AGCACGCGGA CCTTGAGGCG
GTTTTCCCGC CCTTGATGCG TACCCTATCC ACATTGCTGG AGGCGAGCCT GCCGTCCCGC
GTGCTGGCGC TGATCCTGGA GGCGCGTAGC GCAAACCGCT GGCAGGTTTC TCTGAGCGAT
CCACGTCTGC TTGAGCCTGA AGGTGCTGAC TTCTATTTGT CGGTCCGTTG CCGGCTGCCA
GCCGTACAAG TTCAAAGCCA ATTCCCAAGG CTGTGCAAGA TCGGTTCCCC CGATGATGTG
GACCATCTCG TCAATGCGGC ACTCGATGGC GTTCCACTGA AACCTTTGAG CCATGTGCCC
GCCGCGATAC CGCTGCGGCT GGAGAATCAG TACTTCGCGC TCGACCTCAG CCATGCCAAG
GGCCGCGCCA TGCTGGCTGA TGGGGTCTGT GCCCTCTATG TCCCGAGTGT GTTTCAGGAT
GTCCAGCTCG AATTGTTCGC GGTGCTTCGC TCATGA
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| Protein sequence | MKIDRPLWAS GVVLSAQQFQ QQARFESWTN QSIASLGLVH PWGIRSVAFD ADALRLGKLM
ATRLQLCLPD GTLIDTDRLD RLPRALELSR VLPGDIQTAT VVIALPLEQA NGNNCLFEGG
SAERPVRYHQ VWRDTKDLYT SEIQSISVLE HALSLRLADD DNADYLTCPV GRLLRDGKDG
WAIDDTYIPP LLKFDAHAGL LLQLDNLLTQ LSAKRERLMG MRRESNQRMA DFAVADVTLF
WLLNALNTYQ PVLADLKAQP ARHPEQVYQQ LVKLAGGLLT FSLDQHIEDI PAYQHADLEA
VFPPLMRTLS TLLEASLPSR VLALILEARS ANRWQVSLSD PRLLEPEGAD FYLSVRCRLP
AVQVQSQFPR LCKIGSPDDV DHLVNAALDG VPLKPLSHVP AAIPLRLENQ YFALDLSHAK
GRAMLADGVC ALYVPSVFQD VQLELFAVLR S
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