| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3256 |
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| Symbol | |
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| ID | 6112208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3597244 |
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| End bp | 3597747 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641623041 |
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| Product | Hcp1 family type VI secretion system effector |
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| Protein accession | YP_001750113 |
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| Protein GI | 170722425 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATTC CTGTTTATCT GTGGCTGAAA GACGATGGCG GAGCCGATAT CAAAGGCTCG
GTGGATGTAA AGGGTCGTGA GGGTAGTGTT GAAGTGGTCG GTCAAGATCA TGACCTGTAT
ATCCCCACCG ATAACAATAC CGGCAAATTA ACCGGTACGC GCATCCATAC GCCTTTTGTT
TTCACCAAGG AAATAGACGC GTCCTCTCCT TATCTCTACA AGGCCGTGAC CACGGGGCAG
ACGCTGAAAG AAGCAGAATT CAAGTGGTAC AAAATCAATG ATGCCGGGCA AGAGGTGGAG
TATTTCAACA CCAAATTGGA AAACGTCAAG GTCGTGAAAG TTGCACCAAA AATGCACGAC
GTCAAAGACC CAGCGAAAGA AAAGCACAAT CACTTGGAAT TGGTCGAGCT GCGCTACGAA
AAGATCACCT GGGCATTCAA GGATGGGAAC ATCATCCATT CGGACTCTTG GAATGAACGC
CCTAGCGCCG CTGCGGCAGG GTAA
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| Protein sequence | MAIPVYLWLK DDGGADIKGS VDVKGREGSV EVVGQDHDLY IPTDNNTGKL TGTRIHTPFV
FTKEIDASSP YLYKAVTTGQ TLKEAEFKWY KINDAGQEVE YFNTKLENVK VVKVAPKMHD
VKDPAKEKHN HLELVELRYE KITWAFKDGN IIHSDSWNER PSAAAAG
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