Gene PputW619_3229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3229 
Symbol 
ID6112181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3562755 
End bp3563168 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content61% 
IMG OID641623016 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_001750088 
Protein GI170722400 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.168853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.123551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCA TCTCCAATAA TGTGCATCTA CCGGATGCCG AAATCGAACT GACTTACATC 
CGCGCGCAGG GCGCGGGTGG GCAGAACGTC AACAAGGTGT CCAGCGCCGT GCACCTGCGC
TTCGACATCC CGGCCTCATC GTTGCCCGAG TTCTACAAAG AGCGGCTGCT GGCGTTGCGC
GACAGTCGCA TCACCGGCGA GGGTGTTTTG ATCATCAAGG GCCAGCAGTA CCGCACCCAG
GAGCAGAACC GTGCTGACGC ACTGGCGCGT CTTGCCGAGT TGATCATCGC TGCCGGCAAG
ACCGAGAAGA AACGCCGCCC CACCAAGCCG ACCCTCGGTT CGAAGACCCG CCGCCTGGAA
GGCAAAGCCA GGCGGAGCAA TGTCAAGGCG GGTCGGGGCA AAGTGGACTT CTAG
 
Protein sequence
MLIISNNVHL PDAEIELTYI RAQGAGGQNV NKVSSAVHLR FDIPASSLPE FYKERLLALR 
DSRITGEGVL IIKGQQYRTQ EQNRADALAR LAELIIAAGK TEKKRRPTKP TLGSKTRRLE
GKARRSNVKA GRGKVDF