| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3228 |
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| Symbol | |
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| ID | 6112180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3561462 |
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| End bp | 3562679 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641623015 |
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| Product | cytosine deaminase |
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| Protein accession | YP_001750087 |
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| Protein GI | 170722399 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00169195 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.066309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACC GTGAGTTCAT CAATGCCATC GACGCTGATG GCCTGCCCCT GCACATCGCC
GTAAAGAACG GGCGCATCAA CCATATCGGC CCGCAGCGCG CCAGCGAGCC GGCCCGCGAG
ACAATCGACC TTGAAGGCCT GCTGGCATTG CCTGGGTTCG TCGATGGCCA CATTCACCTG
GACAAGAGTT TCGTCGGTGA CCGTTGGCGC CCGCACCAGA GCGTGGCCTC CCTGCGTGAG
CGGCTGGCAG TGGAAAAGCG CGAGCTCGCC AGCGCCCCGC CTATTGTCGA ACGCGCCGAC
GCCCTGATCA GCCAGGCCGC CGCCTTCGGT ACCCTGGCCA TGCGCTGCCA TGTGGATGTG
GACGCCACTA CCGGCCTTGC CAACCTGCGT GCCATCCTCC AAGCCCGCGA GAAGTGGAAA
GACCTGATCG ACATCGAACT GGTGGCCTTC CCCCAGGCCG GCGTGGTGAC CTGCCCCGGC
ACTGCCGAAG TGATGGAGGC TGCCGTACGC GAAGGTGTGC AGGTGGTGGG CGGTATCGAC
CCGACCACCC TGGACGGTGA CGCCGAAGCG CAGCTGGACA TTGTTTTCGG CATCGCCGAC
CGGCACGGGG TGAAGGTTGA TATTCACCTG CACGAGCCAG GCGACATCTG CATAGCCCAG
CTCGAACGCA TCGCCGCACG TACCCAGGCA CTGGGCATGC AAGGTTTGGT AGCGGTCAGC
CATGCCTATG GCCTGGGTGA AGTTGACGAC AGCGTGGTGG ACCGCACCGC CGAAGTGCTG
GCCGGTGCAG GCGTGTCGAT CATGACCAAC GCCCCGGGCG AGCACGCTTT CCCGCCCGTG
CTGCGCTTGC GCGCAGGCGG TGTGCGGGTG TTCACCGGCA ACGACAACAT CCAGGACGCG
TGGTGGCCCT ACGGCAATGG CGACATGCTG CAACGGGCCA TGTTGGTCGG CTATCGTTCG
GGCTTCAATA CTGACGAGGA ACTGCGGGTA GCGCTGCACA TGGCGACCGA AGCCAGTGCC
GGGGTGATGG GTAAAAAGGA CTATGGTCTG AAGGTAGGCA ACGAAGCTAG TTTTGTGCTG
TTCAAAGCCC CGAATGCTGC CGCTGCGGTG GCGGCAGCGC TGCATGAAAG GGTGATCGTG
CGCCACGGCG CGTTCTGGGG CGGGCCTGCG CAGCTGCACC TCAAGGCGTC GCAGTTTGCT
GCAGAACTTC GCCGATAA
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| Protein sequence | MNDREFINAI DADGLPLHIA VKNGRINHIG PQRASEPARE TIDLEGLLAL PGFVDGHIHL
DKSFVGDRWR PHQSVASLRE RLAVEKRELA SAPPIVERAD ALISQAAAFG TLAMRCHVDV
DATTGLANLR AILQAREKWK DLIDIELVAF PQAGVVTCPG TAEVMEAAVR EGVQVVGGID
PTTLDGDAEA QLDIVFGIAD RHGVKVDIHL HEPGDICIAQ LERIAARTQA LGMQGLVAVS
HAYGLGEVDD SVVDRTAEVL AGAGVSIMTN APGEHAFPPV LRLRAGGVRV FTGNDNIQDA
WWPYGNGDML QRAMLVGYRS GFNTDEELRV ALHMATEASA GVMGKKDYGL KVGNEASFVL
FKAPNAAAAV AAALHERVIV RHGAFWGGPA QLHLKASQFA AELRR
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