| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3221 |
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| Symbol | |
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| ID | 6112173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3554730 |
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| End bp | 3556559 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641623008 |
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| Product | citrate transporter |
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| Protein accession | YP_001750080 |
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| Protein GI | 170722392 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.405525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.45192 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGG AACTGCTCTG GGTCCTCGGC CTGCTGGCTG TCGTCATCGC CCTCTTCGTC
ATCAACCGAC CACGCATGGA CGTGGTCGCG CTGCTGGTGA TTCTCGCCCT GCCACTGTCG
GGCATCCTCA CCGTGGAGCA GGCCCTGGCC GGCTTCAGCG ACCCCAACGT TGTATTGATC
GCTGCCTTGT TCGTGATCGG CGAAGGACTG GTGCGTACCG GCATCGCTTA TCGCATCGGC
GAATGGATGA GCGACCGGGC CGGCAATAGC GAAGCACGCC TGCTGGTGTT GCTGATGGTG
TCGGTGGCCG GGCTGGGCTC GGTGATGAGT TCGACTGGCG TGGTTGCGAT CTTTATCCCG
GTGGTACTGA GCATTGCCGC ACGCCTGCAG ATTTCGCCAA GCCGCCTGAT GATGCCGCTG
AGCTTTGCTG GCCTGATCAG CGGCATGCTC AGCCTGGTGG CCACACCGCC CAACGTGGTG
GTGCACAGCG AGCTGGTGCG CCACGGCGAG CAAGGTTTCA GCTTCTTCAG CTTCACGCCG
TTCGGCCTGG TGGTGCTGGT GCTGGGGATT GGTTACATGC TGCTGACACG CCACTGGCTC
AACGGCGAAG TACGCAAGGA TGGTCGGGTG GAAAGCCGCC GTACCCTGCT CGACCTGGTA
CTGGACTATA AGCTCAACGG CCGGGAGCGG CGTCTGCGCA TTCGCGCGCA ATCGCCGCTG
ATCGGCCATA CCCTTGGCGA GTTGGAGCTG CGCACCCGGC ATGGCGCCAA CGTGATCGGT
ATCGAACGTC AGCACAAGTT CACCACGCGG GTGATCGCCG CCGATTCGAG CACCGTCCTG
CAGCAGGGTG ATGTGCTGCT GCTCGACCTG TTCGCCAACC GCGACGACCT GCGCAACCTG
TGCCAGACCA TGCAACTGGA ACCGCTGCAC TTCAAGGCTG CCTATTTCAT CGACCAGTCC
CAGGAGCTGG GCATGGCCGA AGTCTCCCTG CCCCCCGGCT CGCAACTGGT CGGCAAAAGT
ATCCTGGACC TCGCCTTTCG TACCCGCTAC GGCCTTAACG TGGTTGGCTT GCGCCGTGAG
CAGACGGCGA TCGACGAGCG CCTGGTGGAA GAGCCGCTGC GCCTTGGCGA CACGCTGCTT
GTTGTCGGCC CCTGGAAAGC GGTGCGGCAG CTGCAAAGCC AGCCAAAGGA TTTCCTGGTA
CTGAGCTTGC CTGCCGAGAT CGACCAAGTG GCACCAGCCC GTACCCGGGC ACCCTATGCC
CTGATCAGCC TGGCGGTGAT GGTCGGGCTG ATGGTCAGCG GCGTGGTACC CAATGTCATC
GCCGCATTGA TCGGTTGCCT GCTGATGGGG GCCGGGCGCT GCATCGACAT GAACAGCGCC
TACCGCGCCA TCCACTGGCA AAGCCTGGTA CTGATCGTCG GCATGCTGCC CTTCGCCCAA
GCCCTGCAGC AAACCGGGGG CATCGATCTG GCAGTGGGCG GGCTGGTCAG CCTGTTGGGC
GGCGCCGGGC CGATCGCCAT GCTCGCCTGC CTGTTCATGG TCACAGCGGT GATCGGTCTG
TTCATCTCCA ACACGGCTAC CGCAGTACTG ATGGCACCTG TGGCGATCAG CACCGCGACC
CAGCTAGGCC TATCGCCGTA CCCGTTCGCC ATGATCGTGG CCTTGGCCGC ATCGGCGGCG
TTCATGACCC CGGTTTCATC GCCGGTGAAT ACCTTGGTGC TCGGCCCAGG CCAGTACCGC
TTCGCCGACT TCGTCAAGGT TGGTGTGCCC TTCACTGTGC TGGTGATGCT GGTGGCAGTG
GTGATGGTGC CTTGGTTCTA TGGTTTATGA
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| Protein sequence | MNQELLWVLG LLAVVIALFV INRPRMDVVA LLVILALPLS GILTVEQALA GFSDPNVVLI
AALFVIGEGL VRTGIAYRIG EWMSDRAGNS EARLLVLLMV SVAGLGSVMS STGVVAIFIP
VVLSIAARLQ ISPSRLMMPL SFAGLISGML SLVATPPNVV VHSELVRHGE QGFSFFSFTP
FGLVVLVLGI GYMLLTRHWL NGEVRKDGRV ESRRTLLDLV LDYKLNGRER RLRIRAQSPL
IGHTLGELEL RTRHGANVIG IERQHKFTTR VIAADSSTVL QQGDVLLLDL FANRDDLRNL
CQTMQLEPLH FKAAYFIDQS QELGMAEVSL PPGSQLVGKS ILDLAFRTRY GLNVVGLRRE
QTAIDERLVE EPLRLGDTLL VVGPWKAVRQ LQSQPKDFLV LSLPAEIDQV APARTRAPYA
LISLAVMVGL MVSGVVPNVI AALIGCLLMG AGRCIDMNSA YRAIHWQSLV LIVGMLPFAQ
ALQQTGGIDL AVGGLVSLLG GAGPIAMLAC LFMVTAVIGL FISNTATAVL MAPVAISTAT
QLGLSPYPFA MIVALAASAA FMTPVSSPVN TLVLGPGQYR FADFVKVGVP FTVLVMLVAV
VMVPWFYGL
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