Gene PputW619_3221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3221 
Symbol 
ID6112173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3554730 
End bp3556559 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content63% 
IMG OID641623008 
Productcitrate transporter 
Protein accessionYP_001750080 
Protein GI170722392 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.405525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.45192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGG AACTGCTCTG GGTCCTCGGC CTGCTGGCTG TCGTCATCGC CCTCTTCGTC 
ATCAACCGAC CACGCATGGA CGTGGTCGCG CTGCTGGTGA TTCTCGCCCT GCCACTGTCG
GGCATCCTCA CCGTGGAGCA GGCCCTGGCC GGCTTCAGCG ACCCCAACGT TGTATTGATC
GCTGCCTTGT TCGTGATCGG CGAAGGACTG GTGCGTACCG GCATCGCTTA TCGCATCGGC
GAATGGATGA GCGACCGGGC CGGCAATAGC GAAGCACGCC TGCTGGTGTT GCTGATGGTG
TCGGTGGCCG GGCTGGGCTC GGTGATGAGT TCGACTGGCG TGGTTGCGAT CTTTATCCCG
GTGGTACTGA GCATTGCCGC ACGCCTGCAG ATTTCGCCAA GCCGCCTGAT GATGCCGCTG
AGCTTTGCTG GCCTGATCAG CGGCATGCTC AGCCTGGTGG CCACACCGCC CAACGTGGTG
GTGCACAGCG AGCTGGTGCG CCACGGCGAG CAAGGTTTCA GCTTCTTCAG CTTCACGCCG
TTCGGCCTGG TGGTGCTGGT GCTGGGGATT GGTTACATGC TGCTGACACG CCACTGGCTC
AACGGCGAAG TACGCAAGGA TGGTCGGGTG GAAAGCCGCC GTACCCTGCT CGACCTGGTA
CTGGACTATA AGCTCAACGG CCGGGAGCGG CGTCTGCGCA TTCGCGCGCA ATCGCCGCTG
ATCGGCCATA CCCTTGGCGA GTTGGAGCTG CGCACCCGGC ATGGCGCCAA CGTGATCGGT
ATCGAACGTC AGCACAAGTT CACCACGCGG GTGATCGCCG CCGATTCGAG CACCGTCCTG
CAGCAGGGTG ATGTGCTGCT GCTCGACCTG TTCGCCAACC GCGACGACCT GCGCAACCTG
TGCCAGACCA TGCAACTGGA ACCGCTGCAC TTCAAGGCTG CCTATTTCAT CGACCAGTCC
CAGGAGCTGG GCATGGCCGA AGTCTCCCTG CCCCCCGGCT CGCAACTGGT CGGCAAAAGT
ATCCTGGACC TCGCCTTTCG TACCCGCTAC GGCCTTAACG TGGTTGGCTT GCGCCGTGAG
CAGACGGCGA TCGACGAGCG CCTGGTGGAA GAGCCGCTGC GCCTTGGCGA CACGCTGCTT
GTTGTCGGCC CCTGGAAAGC GGTGCGGCAG CTGCAAAGCC AGCCAAAGGA TTTCCTGGTA
CTGAGCTTGC CTGCCGAGAT CGACCAAGTG GCACCAGCCC GTACCCGGGC ACCCTATGCC
CTGATCAGCC TGGCGGTGAT GGTCGGGCTG ATGGTCAGCG GCGTGGTACC CAATGTCATC
GCCGCATTGA TCGGTTGCCT GCTGATGGGG GCCGGGCGCT GCATCGACAT GAACAGCGCC
TACCGCGCCA TCCACTGGCA AAGCCTGGTA CTGATCGTCG GCATGCTGCC CTTCGCCCAA
GCCCTGCAGC AAACCGGGGG CATCGATCTG GCAGTGGGCG GGCTGGTCAG CCTGTTGGGC
GGCGCCGGGC CGATCGCCAT GCTCGCCTGC CTGTTCATGG TCACAGCGGT GATCGGTCTG
TTCATCTCCA ACACGGCTAC CGCAGTACTG ATGGCACCTG TGGCGATCAG CACCGCGACC
CAGCTAGGCC TATCGCCGTA CCCGTTCGCC ATGATCGTGG CCTTGGCCGC ATCGGCGGCG
TTCATGACCC CGGTTTCATC GCCGGTGAAT ACCTTGGTGC TCGGCCCAGG CCAGTACCGC
TTCGCCGACT TCGTCAAGGT TGGTGTGCCC TTCACTGTGC TGGTGATGCT GGTGGCAGTG
GTGATGGTGC CTTGGTTCTA TGGTTTATGA
 
Protein sequence
MNQELLWVLG LLAVVIALFV INRPRMDVVA LLVILALPLS GILTVEQALA GFSDPNVVLI 
AALFVIGEGL VRTGIAYRIG EWMSDRAGNS EARLLVLLMV SVAGLGSVMS STGVVAIFIP
VVLSIAARLQ ISPSRLMMPL SFAGLISGML SLVATPPNVV VHSELVRHGE QGFSFFSFTP
FGLVVLVLGI GYMLLTRHWL NGEVRKDGRV ESRRTLLDLV LDYKLNGRER RLRIRAQSPL
IGHTLGELEL RTRHGANVIG IERQHKFTTR VIAADSSTVL QQGDVLLLDL FANRDDLRNL
CQTMQLEPLH FKAAYFIDQS QELGMAEVSL PPGSQLVGKS ILDLAFRTRY GLNVVGLRRE
QTAIDERLVE EPLRLGDTLL VVGPWKAVRQ LQSQPKDFLV LSLPAEIDQV APARTRAPYA
LISLAVMVGL MVSGVVPNVI AALIGCLLMG AGRCIDMNSA YRAIHWQSLV LIVGMLPFAQ
ALQQTGGIDL AVGGLVSLLG GAGPIAMLAC LFMVTAVIGL FISNTATAVL MAPVAISTAT
QLGLSPYPFA MIVALAASAA FMTPVSSPVN TLVLGPGQYR FADFVKVGVP FTVLVMLVAV
VMVPWFYGL