| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3218 |
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| Symbol | |
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| ID | 6112170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3552544 |
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| End bp | 3553704 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641623005 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001750077 |
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| Protein GI | 170722389 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.317388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCC ATACACCCAC GCTGTTCGCC GCCGTTGCGC TGGTCGCGAC CATCCTGGCG
TTCTGCCTGT TGCTGGTTGG CCAGTCCAAT CGCCAAGACA ATCTCTGGCT TACCGCTTGC
GGCTTGCTCG CCCACGCGTT GGCCTACGTT TGCTACACCG TTTATGGGCA CGCCCCGCTG
TGGCTCAGCT ATGGGGTGGG CAACAGCCTG CTATCACTGG CCCTGGCGTT CTATTCGGCC
AGCCTGTTTC GCGTGCGTGA GCAGGCTGTG CCGTGGCGGC AAGTGTTCAT CATTCCCGCC
TGCATGTTGG TGGGCCTGAT GCTGCTGCTC GACACACTGG AGCCGCGCAT GTTGCTGGCG
ACGCTGGTAC TGATGCTGCA GTGCGCGCTG ATCCTGTACT GGGTGCGGCG TCACGTCGAG
CGGCCGGGCA GGGCGCACCT GTTGCTTCAG ATTGGCGCCG TTGTCAGCCT GGTCGGGCTG
GGCATGCGTG CGCTTGCAGT GGTCAATGGC ACGGCCGTGG AAATGCGCTA CGACACCAGC
AACCTCAAGC AGAGCATTTC CGTCGCCATC GGTACGGTAA CGGTGATGAT GTACTCCATC
GGCCTGGTGC TGATGGCCAA GGAGCGCAGC GAATCACGCC TTAAGCACCT GGCCTTGCGC
GATGTGCTGA CGGGCACCTA CAACCGTCGG GCGATTCTCG AGCGCTTTGC CGTCGAACTG
GACCGCGCCC GTGGCGAACG CAGCAGCTTG GCCGTGGCGA TGATCGATCT CGACCATTTC
AAGCGTATCA ATGACCTGTA CGGGCACCTG GCCGGGGACG AGGTGTTATG CCATTGCGTA
CGCCAGTTGG AGCAGCGCCT GCGCCACGGC GACAGTCTCG GGCGCTATGG GGGGGAGGAG
TTCCTGTTGC TATTGCCACA CGCCGATCGT GACGGCGCGA TGGCAGCCTT GCAAGGCCTG
AGGGAGGCCA TTGCCCTCAG CCCGGCGCAC TTTGCCGGTG ACCAGATCAC GCTGCGCTTC
AGCGTAGGGC TGTGGTGCGG TGTGCCTGGC CCGCACGACA CTACCGCGAG CCTGCTTGCC
CAGGCTGACG CGGCGCTGTA TCAGGCCAAG GCAGCCGGGC GCAACACAGT GCACATGGTG
GCGTTGACCG CTGCCGGTTG A
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| Protein sequence | MIAHTPTLFA AVALVATILA FCLLLVGQSN RQDNLWLTAC GLLAHALAYV CYTVYGHAPL
WLSYGVGNSL LSLALAFYSA SLFRVREQAV PWRQVFIIPA CMLVGLMLLL DTLEPRMLLA
TLVLMLQCAL ILYWVRRHVE RPGRAHLLLQ IGAVVSLVGL GMRALAVVNG TAVEMRYDTS
NLKQSISVAI GTVTVMMYSI GLVLMAKERS ESRLKHLALR DVLTGTYNRR AILERFAVEL
DRARGERSSL AVAMIDLDHF KRINDLYGHL AGDEVLCHCV RQLEQRLRHG DSLGRYGGEE
FLLLLPHADR DGAMAALQGL REAIALSPAH FAGDQITLRF SVGLWCGVPG PHDTTASLLA
QADAALYQAK AAGRNTVHMV ALTAAG
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