| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3211 |
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| Symbol | |
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| ID | 6112163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3547329 |
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| End bp | 3548348 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641622998 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_001750070 |
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| Protein GI | 170722382 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.888582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.61318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTTTC TTGCCGAATA CGCAAGCTTT CTCGCTAAAA CCGCCACCCT GGTGATTGCC
ATCCTGGTGG TGCTGTCTGC CATCGCCGGC TTGCGCGGCA AGGGGCGGCG CAAGGCTGGC
GGGCAGTTGC AGGTCACCCG TCTCAACGAA TTCTACAAAG AGCTGCGCGA GCGGTTGGAA
GCGGGCTTGC TCGACAAGGC CCAGCTCAAG GCCCTGCGCA AGCAGCAGGC CAAAGCGGAA
AAACAGCAGA AAAAAGGCAA GGTCGAAGAG AAAGGCCGGG TGTTCGTACT CGACTTCGAT
GGCGACATCA AGGCGTCCGC CACCGAAAGC CTGCGCAACG AAATCACGGC GCTGCTGACC
CTCGCCACCC CGCGTGACGA AGTCGTGCTG CGCCTGGAAA GCGGTGGCGG CCTGGTGCAC
AGCTACGGCC TTGCGGCCTC GCAACTGGCG CGCATCCGCC AGGCCGGCAT TCCGCTGACC
GTGTGCATCG ACAAGGTAGC CGCCAGCGGT GGTTACATGA TGGCCTGTAT CGGCGAGAAA
ATCGTCAGCG CGCCCTTTGC CGTGCTTGGC TCGATCGGCG TCGTGGCGCA GTTGCCGAAC
GTCAACCGTC TGCTGAAAAA GCACAACATC GATTTCGAAG TACTGACCGC CGGCGAGTAC
AAGCGCACCC TGACCGTGTT CGGTGAGAAC ACCGAGAAGG GCCGCGAGAA GTTCCAGGAA
GACTTGGACA TCACGCACCA GCTGTTCAAG GACTTTGTCG CCCGCTACCG CCCGCAGTTG
CACATCGACG AAGTGGCTAC CGGCGAAGTC TGGTTGGGTG TCGCCGCGCT AAATCGCAAG
CTGGTGGATC AGTTGCAGAC CAGCGACGAG TACCTCAGCG AGCGCGCCCG CAACGCCAGC
CTGTTCCATG TGCACTATGC CGAACGCAAA AGCCTGCAGG AGCGAATCGG CATGGCGGCG
AGCGGTGCGG TTGAGAACGC CGTGGTAGGT TTGTGGAGCA AACTTGGCCG CTTGCGCTAA
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| Protein sequence | MEFLAEYASF LAKTATLVIA ILVVLSAIAG LRGKGRRKAG GQLQVTRLNE FYKELRERLE
AGLLDKAQLK ALRKQQAKAE KQQKKGKVEE KGRVFVLDFD GDIKASATES LRNEITALLT
LATPRDEVVL RLESGGGLVH SYGLAASQLA RIRQAGIPLT VCIDKVAASG GYMMACIGEK
IVSAPFAVLG SIGVVAQLPN VNRLLKKHNI DFEVLTAGEY KRTLTVFGEN TEKGREKFQE
DLDITHQLFK DFVARYRPQL HIDEVATGEV WLGVAALNRK LVDQLQTSDE YLSERARNAS
LFHVHYAERK SLQERIGMAA SGAVENAVVG LWSKLGRLR
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