| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3207 |
|---|
| Symbol | |
|---|
| ID | 6112158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 3543012 |
|---|
| End bp | 3543686 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641622993 |
|---|
| Product | alginate lyase 2 |
|---|
| Protein accession | YP_001750066 |
|---|
| Protein GI | 170722378 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.841642 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTGA ACATTGATAA CCTCATCATC ACCACTCCGG TGCCGAAATC CGCCTCCAAC
CCGGTTGCCT TGGAAGTCAC CGGCGCACAG GCCTTGGCTA GCCTGACCAA CGTCGTTGCA
CGCCAGAGTG ACGGCTCGAT ACGCATGACC GCGCCGACCA AGGGTGCGTC CAGCAAGAGT
ACTCACCGCA CACGCTGCGA ATGGAAAGAA CCCGTGTATT GGTCACTGGG CAGCGCAGCG
CGCCACCGCA ACCACCAGAC AATGACCCTG GAGAAGGTCA ATCTGGCGCA AAAGGTGGTA
ATTGCCCAGT TGCATGTGAA AGACAATAAC AGCCCGCCAA TCAAGGTGTT CTGGAACAAA
GGCAAAATCA CTGTCGGCTT TCGTTCAGAT TTTAACCAAG CCACGCCAGC CAACAGCACC
GTGCTGGCCG AGGTGCCGCT GGGTGCGCGT TTCGATGTGA GCATCGTGGT GAGTGAAGAT
GGCGCTTGCA CGGTCAGCGC AAGCAGCAAT GGCCGCAGCG GCACCACGAC CGCACTGCAA
CTGGCGCCAT CCTGGGCGAC GCAGACGCTG AATTTTCACG GTGGAGTCTA CAACCAGGTG
GACTACAGCA ATGACACGCC GCCAGGGGAT GCTTCGGTGT GCGTAATCAG CGCACTTGAA
CTGAGCCATG AGTGA
|
|---|
| Protein sequence | MAVNIDNLII TTPVPKSASN PVALEVTGAQ ALASLTNVVA RQSDGSIRMT APTKGASSKS
THRTRCEWKE PVYWSLGSAA RHRNHQTMTL EKVNLAQKVV IAQLHVKDNN SPPIKVFWNK
GKITVGFRSD FNQATPANST VLAEVPLGAR FDVSIVVSED GACTVSASSN GRSGTTTALQ
LAPSWATQTL NFHGGVYNQV DYSNDTPPGD ASVCVISALE LSHE
|
|---|
| |