Gene PputW619_3136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3136 
Symbol 
ID6112086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3472052 
End bp3473185 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content59% 
IMG OID641622921 
Productserine-pyruvate transaminase 
Protein accessionYP_001749995 
Protein GI170722307 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACGC TTTATCCCAG TATTGATCCT GAGGGGCTGG TCGAGTACTC GGTGGTCTAC 
ACCGACCGCT CGCTCAATCA CATGTCACAG GCATTTCAAG GCGTGATGAA AAACATTTCC
AGGACCCTGA AACAGGTCTA CAACGCCCAG GCTGTTGCGG TGGTACCAGG GAGCGGCACA
TTCGGCATGG AAGCGGTGGC ACGGCAGTTT GCCACCGGCC AGCAATGCTT GGTGATACGC
AACGGCTGGT TCAGTTATCG CTGGAGCCAG ATCCTTGATA TGGGCAACAT TCCGGCAGCC
ACAACGGTGC TGAAAGCCCG ACCGATAGAC ACGGGTCGCC AAGCGGCTTA CGCCCCACCC
CCTCTTGACG AAGTCCTGGC AGCCATCAAG GCGCAGAAGC CGCAGATGGT CTTCGCCCCC
CACGTTGAAA CCTCATCGGG GATTATCCTG CCCGACGAAT ACGTCCGGGC CGTCGGCGAC
GCCGTGCATG AAGTGGGTGG CTTGTTCGTG CTGGACTGCA TCGCCTCCGG CACGCTTTGG
GTTGATATGC AGAAATGTGC AGTGGACTTG CTGATCAGCG CACCGCAGAA AGGCTGGAGC
GCCTCCCCTT GCTGTGCCCT GGTGATGTTC AGCGCGTTGG CACTGGAGCG CATGGAGCAG
ACGCGTAGCA GCAGCTTTGC CTGCGACCTG AAAAAGTGGC TTCAGATCAT GCAGGCCTAC
GAACAGGGCG GGCATGCCTA CCATGCGACC ATGCCCAGCG ACTCGCTCGC GCGATTCAAC
GACGTGATGA ACGAGATGCA GGCCTACGGT TTCGATAAGG TCCGCGGCGA ACAACAGGCT
CTGGGCGATC GGGTACGCAC CATGTTGACC CGCAAAGGCA TCAAAAGCGT GGCTGCTGCC
GGTTTTCAGG CCCCTGGCGT AGTGGTGAGC TACACCGACG ATGCGGGTAT CAAGACCGGT
AAGAAATTTG CCGACCACGG CCTACAGATC GCCGCCGGGG TACCGTTGCA ATGCGACGAG
CCCGCCGATT TCCAGACCTT CCGCATCGGT CTGTTCGGGC TCGAAAAACT ACACAATATC
GAGCGCACGG TCAGCACCCT CGAGCAGGCG ATCAACGAAG TGATGGCGAC CTAA
 
Protein sequence
MSTLYPSIDP EGLVEYSVVY TDRSLNHMSQ AFQGVMKNIS RTLKQVYNAQ AVAVVPGSGT 
FGMEAVARQF ATGQQCLVIR NGWFSYRWSQ ILDMGNIPAA TTVLKARPID TGRQAAYAPP
PLDEVLAAIK AQKPQMVFAP HVETSSGIIL PDEYVRAVGD AVHEVGGLFV LDCIASGTLW
VDMQKCAVDL LISAPQKGWS ASPCCALVMF SALALERMEQ TRSSSFACDL KKWLQIMQAY
EQGGHAYHAT MPSDSLARFN DVMNEMQAYG FDKVRGEQQA LGDRVRTMLT RKGIKSVAAA
GFQAPGVVVS YTDDAGIKTG KKFADHGLQI AAGVPLQCDE PADFQTFRIG LFGLEKLHNI
ERTVSTLEQA INEVMAT